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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

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  • ACTB
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Tissue methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2608.5 nTPM
HPA Brain:2482.2 nTPM
GTEx:2608.5 nTPM
FANTOM5:3346.0 Scaled Tags Per Million
Pig:3277.1 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2482.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 2149.2
1981 Female, age 72, midline 2725.6
2565 Male, age 75, midline 2187.0
2816 Male, age 47, midline 2072.7
2194 Female, age 79, both hemispheres 1983.9
2048 Male, age 55, midline 1776.7
Cervical spinal cord, dorsal horn
nTPM: 2418.7
2173 Female, age 72, unknown 3072.3
2296 Male, age 66, both hemispheres 2795.4
2069 Male, age 47, both hemispheres 2672.0
2721 Male, age 90, both hemispheres 2049.5
2297 Male, age 75, both hemispheres 1969.6
1877 Male, age 55, unknown 1953.8
Cervical spinal cord, ventral horn
nTPM: 2482.2
2098 Female, age 72, unknown 3444.1
2295 Male, age 66, both hemispheres 2546.1
2480 Male, age 75, both hemispheres 2539.0
2809 Male, age 90, both hemispheres 2533.0
2068 Male, age 55, unknown 2064.1
2820 Female, age 79, both hemispheres 1766.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2608.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 2608.5
Samples: 204

Max nTPM: 5201.5
Min nTPM: 1052.5
Std nTPM: 714.8
Median nTPM: 2458.1
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 5201.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 4921.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 4687.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 4489.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 4429.5
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 4360.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 4338.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 4229.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 4185.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 4083.7
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 3879.3
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 3832.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 3807.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 3674.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 3659.0
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 3607.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 3576.5
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 3569.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 3553.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 3524.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 3522.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 3519.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3497.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 3496.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 3460.3
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 3432.7
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 3431.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 3430.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 3414.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 3392.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 3375.1
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 3367.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 3360.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 3359.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 3338.7
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 3331.0
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 3289.7
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 3238.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 3229.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 3191.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 3183.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 3169.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 3144.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 3130.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 3106.5
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 3104.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 3084.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 3075.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 3066.0
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 3009.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2990.4
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 2986.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 2986.0
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 2979.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2961.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2949.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 2928.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 2925.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2906.1
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 2900.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2868.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2841.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2839.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2830.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 2808.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2804.2
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 2803.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2803.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 2800.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 2797.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2776.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 2773.9
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 2761.2
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 2734.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2730.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 2710.0
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 2680.0
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2673.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 2662.0
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 2661.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2643.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 2626.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 2625.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 2619.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2615.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 2598.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 2597.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 2596.9
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 2595.3
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 2594.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 2593.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2587.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2576.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 2554.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2527.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2518.7
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 2496.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 2483.2
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2483.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 2462.6
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 2460.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 2460.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 2455.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 2426.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 2424.9
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 2418.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 2415.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 2404.2
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 2400.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 2395.1
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 2391.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 2390.8
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 2385.3
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 2382.1
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 2378.5
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 2369.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 2368.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 2362.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 2356.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2356.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 2356.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 2349.4
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2344.8
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 2342.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 2330.5
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 2325.8
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 2316.7
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 2301.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 2296.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 2290.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 2290.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 2288.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 2276.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 2275.8
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 2255.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 2244.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2243.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 2234.9
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2234.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2230.8
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 2220.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 2218.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 2214.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 2212.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 2205.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 2204.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 2204.2
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 2186.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 2174.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 2172.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 2170.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2169.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 2162.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 2148.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 2141.5
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 2131.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 2130.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2119.4
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 2112.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2088.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2065.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 2042.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 2015.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 2012.5
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1991.6
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 1987.9
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1984.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1983.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1982.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1977.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1946.9
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1941.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 1921.1
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1917.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1916.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1913.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1906.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1902.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1900.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1897.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1896.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1887.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1869.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1865.5
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1852.6
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1846.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1825.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1808.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1769.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1744.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1715.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1708.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1695.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1658.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1646.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1580.1
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1555.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 1463.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1403.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1401.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1385.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1252.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1180.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1052.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3346.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 3346.0
FF:10181-103D1 60 years, female 3384.8
FF:10159-103A6 76 years, female 3307.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3277.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 2952.4
Samples: 4

Max nTPM: 3651.8
Min nTPM: 2414.7
Sample A Female 2414.7
Sample B Female 2906.1
Sample C Male 3651.8
Sample D Male 2837.1
Ventral spinal cord
nTPM: 3277.2
Samples: 4

Max nTPM: 3425.0
Min nTPM: 3111.2
Sample A Female 3111.2
Sample B Female 3270.4
Sample C Male 3302.1
Sample D Male 3425.0

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