HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:113.7 nTPM
HPA Brain:201.6 nTPM
GTEx:113.7 nTPM
FANTOM5:372.1 Scaled Tags Per Million
Pig:175.5 nTPM
Mouse:315.8 nTPM
Allen mouse:17.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039319
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 201.6
Sample id Sample description nTPM
Hippocampus
nTPM: 163.3
1898 Male, age 80, left hemisphere 203.3
1855 Male, age 76, left hemisphere 173.3
2621 Female, age 67, right hemisphere 158.1
2529 Female, age 94, left hemisphere 155.3
2148 Female, age 91, left hemisphere 151.2
1911 Female, age 85, right hemisphere 139.0
Dentate gyrus
nTPM: 155.7
2010 Male, age 76, both hemispheres 171.3
1927 Female, age 91, both hemispheres 159.2
2530 Female, age 94, left hemisphere 155.8
2246 Female, age 85, both hemispheres 154.1
2528 Male, age 74, both hemispheres 152.2
2531 Female, age 67, both hemispheres 141.6
Entorhinal gyrus
nTPM: 158.6
1938 Female, age 85, left hemisphere 172.4
2764 Male, age 80, right hemisphere 169.8
2117 Female, age 91, right hemisphere 165.7
1787 Male, age 76, left hemisphere 158.8
2613 Female, age 94, left hemisphere 147.0
2686 Male, age 75, right hemisphere 138.1
Hippocampus, CA1
nTPM: 185.2
2749 Male, age 80, left hemisphere 243.6
2045 Male, age 76, both hemispheres 194.6
2527 Male, age 74, both hemispheres 171.4
1873 Female, age 85, both hemispheres 165.2
2082 Female, age 91, right hemisphere 151.1
Hippocampus, CA2
nTPM: 167.6
1892 Male, age 76, both hemispheres 185.0
2249 Male, age 74, both hemispheres 178.2
1963 Male, age 80, left hemisphere 172.5
1940 Female, age 85, left hemisphere 170.5
2113 Female, age 91, right hemisphere 153.0
2437 Female, age 94, left hemisphere 146.7
Hippocampus, CA3
nTPM: 172.0
2436 Male, age 74, both hemispheres 220.1
2137 Male, age 80, left hemisphere 211.2
1867 Male, age 76, both hemispheres 179.4
2620 Female, age 94, left hemisphere 144.2
2861 Female, age 67, both hemispheres 140.9
1891 Female, age 85, both hemispheres 136.3
Parahippocampal cortex
nTPM: 177.7
2250 Female, age 67, right hemisphere 221.8
1850 Male, age 80, both hemispheres 208.5
2245 Female, age 91, both hemispheres 180.8
2532 Female, age 72, left hemisphere 179.4
1933 Female, age 85, both hemispheres 177.2
2018 Male, age 76, both hemispheres 171.8
2622 Female, age 67, right hemisphere 166.6
1990 Female, age 91, right hemisphere 163.5
2693 Female, age 94, both hemispheres 157.7
2692 Male, age 74, both hemispheres 149.8
Perirhinal gyrus
nTPM: 201.6
1794 Male, age 80, right hemisphere 225.7
1841 Female, age 85, right hemisphere 212.3
2521 Female, age 94, right hemisphere 199.2
1847 Female, age 91, left hemisphere 197.0
2848 Male, age 76, right hemisphere 174.1
Subiculum
nTPM: 149.1
2729 Female, age 91, right hemisphere 155.6
1901 Male, age 80, both hemispheres 153.5
1977 Female, age 85, both hemispheres 152.3
2619 Male, age 74, both hemispheres 150.0
2438 Female, age 94, left hemisphere 149.1
2042 Male, age 76, both hemispheres 133.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 113.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 113.7
Samples: 255

Max nTPM: 209.8
Min nTPM: 57.8
Std nTPM: 26.4
Median nTPM: 111.6
GTEX-15EO6-0011-R1b-SM-H7OGP 50-59 years, male 209.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 192.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 187.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 181.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 171.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 169.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 169.0
GTEX-1LH75-0011-R1a-SM-F341Y 50-59 years, female 166.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 166.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 162.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 161.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 372.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 372.1
FF:10169-103B7 60 years, female 439.3
FF:10153-102I9 76 years, female 304.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 175.5
Pig sample Sample description nTPM
Subiculum
nTPM: 152.1
Samples: 4

Max nTPM: 180.2
Min nTPM: 135.6
Sample A Female 180.2
Sample B Female 135.6
Sample C Male 149.0
Sample D Male 143.5
Dorsal hippocampus
nTPM: 153.1
Samples: 4

Max nTPM: 183.5
Min nTPM: 119.6
Sample A Female 183.5
Sample B Female 155.8
Sample C Male 153.5
Sample D Male 119.6
Entorhinal cortex
nTPM: 170.8
Samples: 4

Max nTPM: 184.5
Min nTPM: 146.9
Sample A Female 184.5
Sample B Female 171.9
Sample C Male 179.7
Sample D Male 146.9
Ventral hippocampus
nTPM: 175.6
Samples: 4

Max nTPM: 242.3
Min nTPM: 121.3
Sample A Female 200.5
Sample B Female 121.3
Sample C Male 242.3
Sample D Male 138.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 315.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 315.8
Samples: 4

Max nTPM: 364.1
Min nTPM: 286.0
Sample A Male 315.7
Sample B Male 297.4
Sample C Female 286.0
Sample D Female 364.1
Hippocampal formation
nTPM: 279.2
Samples: 4

Max nTPM: 302.2
Min nTPM: 255.9
Sample A Male 255.9
Sample B Male 274.9
Sample C Female 302.2
Sample D Female 283.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
68799083 Antisense, RP_050217_02_A05, Mouse strain C57BL/6J (56 days, male) 17.8

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