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  • TISSUE

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  • APLP2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:140.8 nTPM
HPA Brain:255.4 nTPM
GTEx:140.8 nTPM
Pig:171.0 nTPM
Mouse:380.0 nTPM
Allen mouse:18.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 237.4
2226 Male, age 75, left hemisphere 279.9
1961 Female, age 42, unknown 194.9
Dorsomedial nucleus
nTPM: 209.0
1989 Male, age 62, unknown 251.1
2041 Female, age 72, unknown 196.1
2017 Female, age 42, unknown 179.8
Lateral hypothalamic area
nTPM: 255.4
2271 Male, age 75, both hemispheres 321.8
1791 Male, age 80, right hemisphere 302.7
2228 Male, age 66, unknown 221.9
2412 Male, age 62, unknown 175.4
Mammillary body
nTPM: 226.4
1923 Female, age 72, unknown 276.1
2413 Male, age 66, unknown 268.1
1948 Female, age 72, unknown 212.4
1945 Male, age 80, right hemisphere 192.2
1834 Female, age 42, unknown 183.4
Paraventricular nucleus
nTPM: 177.9
2700 Male, age 62, unknown 177.9
Preoptic area
nTPM: 197.1
1907 Male, age 80, right hemisphere 226.0
1861 Female, age 42, unknown 191.6
2414 Female, age 72, unknown 173.8
Supraoptic nucleus
nTPM: 223.1
2835 Female, age 72, unknown 235.8
1894 Female, age 72, unknown 227.7
2043 Male, age 62, unknown 205.6
Ventromedial nucleus
nTPM: 197.0
1982 Female, age 72, unknown 201.4
1822 Female, age 42, unknown 192.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 140.8
Samples: 257

Max nTPM: 267.3
Min nTPM: 73.1
Std nTPM: 32.3
Median nTPM: 137.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 267.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 255.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 243.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 242.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 233.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 227.6
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 207.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 206.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 204.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 203.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 200.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 197.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 196.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 195.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 191.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 191.3
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 188.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 188.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 185.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 184.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 183.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 182.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 181.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 181.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 180.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 180.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 179.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 178.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 177.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 176.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 175.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 173.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 173.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 171.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 171.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 170.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 170.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 169.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 169.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 168.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 168.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 168.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 167.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 167.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 167.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 167.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 166.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 165.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 165.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 165.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 165.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 165.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 165.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 164.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 163.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 163.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 163.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 163.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 163.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 163.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 162.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 162.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 161.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 161.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 160.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 160.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 160.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 160.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 159.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 159.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 158.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 158.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 158.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 156.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 156.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 156.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 155.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 155.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 154.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 154.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 153.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 153.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 153.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 152.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 152.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 152.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 151.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 151.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 151.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 151.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 150.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 149.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 149.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 148.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 148.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 148.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 148.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 148.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 148.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 148.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 148.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 147.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 147.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 147.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 147.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 147.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 146.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 146.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 146.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 146.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 146.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 146.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 145.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 145.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 145.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 144.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 144.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 144.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 142.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 142.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 141.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 141.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 140.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 140.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 139.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 139.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 138.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 138.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 137.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 137.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 137.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 137.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 137.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 136.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 136.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 136.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 135.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 135.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 135.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 135.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 135.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 134.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 134.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 134.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 133.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 133.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 133.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 133.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 133.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 132.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 132.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 131.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 131.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 130.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 130.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 130.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 130.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 129.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 129.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 129.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 128.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 128.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 127.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 127.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 127.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 127.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 126.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 126.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 125.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 125.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 124.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 124.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 123.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 123.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 123.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 122.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 122.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 122.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 122.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 122.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 122.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 122.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 122.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 122.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 121.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 121.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 120.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 120.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 119.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 119.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 119.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 119.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 117.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 117.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 117.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 117.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 116.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 116.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 116.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 115.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 115.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 114.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 114.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 113.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 113.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 113.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 111.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 111.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 110.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 110.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 110.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 108.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 108.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 108.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 107.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 107.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 106.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 106.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 106.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 106.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 105.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 105.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 105.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 104.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 104.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 104.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 103.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 103.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 103.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 102.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 101.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 101.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 99.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 99.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 99.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 99.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 99.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 98.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 98.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 98.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 97.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 96.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 96.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 96.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 94.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 91.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 91.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 91.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 90.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 89.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 87.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 87.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 84.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 81.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 80.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 73.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 73.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 171.0
Samples: 4

Max nTPM: 197.6
Min nTPM: 133.6
Sample A Female 197.6
Sample B Female 171.9
Sample C Male 180.9
Sample D Male 133.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

380.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 380.0
Samples: 4

Max nTPM: 394.6
Min nTPM: 359.0
Sample A Male 359.0
Sample B Male 386.8
Sample C Female 394.6
Sample D Female 379.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.3
68799083 Antisense, RP_050217_02_A05, Mouse strain C57BL/6J (56 days, male) 18.3

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