A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
92.2
nTPM
Monaco:
92.2
nTPM
Schmiedel:
284.2
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
92.2
HPA sample
nTPM
Classical monocyte nTPM: 84.1
Samples: 6
Max nTPM: 152.4
Min nTPM: 55.8
P10809_1003
152.4
P10809_1020
92.9
P10809_1039
84.3
P10809_1058
55.8
P10809_1080
59.8
P10809_1107
59.2
Intermediate monocyte nTPM: 92.2
Samples: 6
Max nTPM: 125.4
Min nTPM: 55.8
P10809_1004
104.7
P10809_1023
98.2
P10809_1042
92.6
P10809_1061
125.4
P10809_1081
55.8
P10809_1108
76.7
Non-classical monocyte nTPM: 86.4
Samples: 5
Max nTPM: 114.3
Min nTPM: 51.5
P10809_1005
114.3
P10809_1053
100.0
P10809_1072
93.0
P10809_1082
51.5
P10809_1109
73.3
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
92.2
Monaco sample
nTPM
Classical monocyte nTPM: 82.1
Samples: 4
Max nTPM: 93.7
Min nTPM: 75.0
RHH5313_R3680
75.0
RHH5221_R3593
93.7
RHH5250_R3622
84.2
RHH5279_R3651
75.4
Intermediate monocyte nTPM: 92.2
Samples: 4
Max nTPM: 135.6
Min nTPM: 70.9
RHH5314_R3681
85.4
RHH5222_R3594
135.6
RHH5251_R3623
70.9
RHH5280_R3652
76.8
Non-classical monocyte nTPM: 80.8
Samples: 4
Max nTPM: 88.1
Min nTPM: 71.6
RHH5315_R3682
71.6
RHH5223_R3595
87.0
RHH5252_R3624
76.4
RHH5281_R3653
88.1
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
284.2
Schmiedel sample id
TPM
Classical monocyte TPM: 279.2
Samples: 91
Max TPM: 365.8
Min TPM: 151.2
MONOCYTES_1
365.8
MONOCYTES_2
362.5
MONOCYTES_3
358.4
MONOCYTES_4
344.2
MONOCYTES_5
340.5
MONOCYTES_6
334.6
MONOCYTES_7
332.8
MONOCYTES_8
329.5
MONOCYTES_9
327.0
MONOCYTES_10
325.7
MONOCYTES_11
324.0
MONOCYTES_12
321.9
MONOCYTES_13
320.2
MONOCYTES_14
319.2
MONOCYTES_15
316.8
MONOCYTES_16
315.6
MONOCYTES_17
313.7
MONOCYTES_18
313.3
MONOCYTES_19
312.5
MONOCYTES_20
311.6
MONOCYTES_21
311.4
MONOCYTES_22
310.5
MONOCYTES_23
310.4
MONOCYTES_24
308.8
MONOCYTES_25
305.4
MONOCYTES_26
303.6
MONOCYTES_27
303.2
MONOCYTES_28
303.2
MONOCYTES_29
303.2
MONOCYTES_30
300.2
MONOCYTES_31
296.0
MONOCYTES_32
293.6
MONOCYTES_33
293.5
MONOCYTES_34
293.1
MONOCYTES_35
291.4
MONOCYTES_36
291.4
MONOCYTES_37
289.2
MONOCYTES_38
289.2
MONOCYTES_39
284.2
MONOCYTES_40
283.6
MONOCYTES_41
282.3
MONOCYTES_42
281.8
MONOCYTES_43
279.6
MONOCYTES_44
278.6
MONOCYTES_45
278.4
MONOCYTES_46
277.8
MONOCYTES_47
276.7
MONOCYTES_48
276.3
MONOCYTES_49
276.1
MONOCYTES_50
275.7
MONOCYTES_51
275.3
MONOCYTES_52
274.4
MONOCYTES_53
274.3
MONOCYTES_54
273.3
MONOCYTES_55
273.3
MONOCYTES_56
273.3
MONOCYTES_57
265.7
MONOCYTES_58
264.4
MONOCYTES_59
263.4
MONOCYTES_60
262.2
MONOCYTES_61
260.7
MONOCYTES_62
258.9
MONOCYTES_63
256.5
MONOCYTES_64
256.4
MONOCYTES_65
256.0
MONOCYTES_66
255.8
MONOCYTES_67
254.2
MONOCYTES_68
253.5
MONOCYTES_69
252.5
MONOCYTES_70
250.8
MONOCYTES_71
249.1
MONOCYTES_72
249.0
MONOCYTES_73
249.0
MONOCYTES_74
247.7
MONOCYTES_75
244.3
MONOCYTES_76
243.1
MONOCYTES_77
242.7
MONOCYTES_78
240.4
MONOCYTES_79
237.7
MONOCYTES_80
236.7
MONOCYTES_81
236.3
MONOCYTES_82
235.6
MONOCYTES_83
229.2
MONOCYTES_84
227.6
MONOCYTES_85
227.3
MONOCYTES_86
227.1
MONOCYTES_87
224.7
MONOCYTES_88
223.2
MONOCYTES_89
197.9
MONOCYTES_90
193.3
MONOCYTES_91
151.2
Show allShow less
Non-classical monocyte TPM: 284.2
Samples: 90
Max TPM: 361.2
Min TPM: 144.4
M2_1
361.2
M2_2
338.5
M2_3
336.7
M2_4
335.2
M2_5
334.1
M2_6
333.2
M2_7
328.9
M2_8
328.2
M2_9
327.1
M2_10
326.0
M2_11
324.7
M2_12
323.5
M2_13
323.1
M2_14
321.4
M2_15
320.9
M2_16
308.7
M2_17
305.0
M2_18
303.4
M2_19
302.3
M2_20
299.4
M2_21
297.4
M2_22
296.2
M2_23
295.6
M2_24
295.5
M2_25
295.1
M2_26
294.9
M2_27
294.5
M2_28
293.1
M2_29
290.6
M2_30
290.4
M2_31
290.2
M2_32
290.2
M2_33
289.7
M2_34
289.5
M2_35
289.3
M2_36
288.4
M2_37
288.0
M2_38
287.5
M2_39
286.0
M2_40
285.8
M2_41
285.7
M2_42
283.6
M2_43
283.0
M2_44
282.6
M2_45
282.4
M2_46
282.3
M2_47
282.1
M2_48
281.0
M2_49
280.3
M2_50
278.7
M2_51
278.6
M2_52
277.9
M2_53
277.0
M2_54
276.9
M2_55
276.0
M2_56
275.7
M2_57
275.3
M2_58
274.6
M2_59
274.2
M2_60
273.7
M2_61
273.5
M2_62
272.8
M2_63
272.7
M2_64
272.2
M2_65
270.8
M2_66
270.7
M2_67
270.7
M2_68
269.4
M2_69
269.1
M2_70
268.9
M2_71
265.8
M2_72
265.7
M2_73
264.7
M2_74
261.5
M2_75
261.5
M2_76
260.8
M2_77
260.2
M2_78
259.8
M2_79
259.5
M2_80
259.3
M2_81
255.3
M2_82
255.1
M2_83
255.0
M2_84
253.8
M2_85
252.9
M2_86
247.4
M2_87
246.5
M2_88
226.2
M2_89
223.1
M2_90
144.4
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.