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  • SUMMARY

  • TISSUE

  • BRAIN

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  • CD59
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:248.7 nTPM
HPA Brain:391.0 nTPM
GTEx:248.7 nTPM
Pig:86.7 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

391.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 391.0
2226 Male, age 75, left hemisphere 410.6
1961 Female, age 42, unknown 371.4
Dorsomedial nucleus
nTPM: 292.2
2041 Female, age 72, unknown 350.1
2017 Female, age 42, unknown 271.1
1989 Male, age 62, unknown 255.6
Lateral hypothalamic area
nTPM: 316.4
1791 Male, age 80, right hemisphere 373.0
2228 Male, age 66, unknown 348.4
2271 Male, age 75, both hemispheres 278.1
2412 Male, age 62, unknown 266.3
Mammillary body
nTPM: 377.5
1923 Female, age 72, unknown 481.0
2413 Male, age 66, unknown 456.6
1948 Female, age 72, unknown 342.6
1834 Female, age 42, unknown 327.3
1945 Male, age 80, right hemisphere 280.1
Paraventricular nucleus
nTPM: 248.8
2700 Male, age 62, unknown 248.8
Preoptic area
nTPM: 275.8
1907 Male, age 80, right hemisphere 318.9
1861 Female, age 42, unknown 295.2
2414 Female, age 72, unknown 213.3
Supraoptic nucleus
nTPM: 377.9
1894 Female, age 72, unknown 428.9
2835 Female, age 72, unknown 372.7
2043 Male, age 62, unknown 332.0
Ventromedial nucleus
nTPM: 340.7
1822 Female, age 42, unknown 356.3
1982 Female, age 72, unknown 325.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 248.7
Samples: 257

Max nTPM: 622.6
Min nTPM: 112.7
Std nTPM: 79.4
Median nTPM: 233.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 622.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 570.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 526.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 485.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 475.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 462.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 454.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 436.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 435.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 432.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 421.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 409.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 408.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 405.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 401.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 390.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 387.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 387.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 375.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 370.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 367.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 367.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 361.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 361.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 352.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 351.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 347.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 343.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 341.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 339.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 337.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 334.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 334.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 330.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 328.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 328.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 325.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 319.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 317.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 317.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 313.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 312.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 311.6
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 310.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 308.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 307.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 306.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 304.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 304.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 303.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 303.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 302.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 301.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 300.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 300.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 296.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 296.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 294.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 294.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 294.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 293.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 292.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 292.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 292.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 287.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 284.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 280.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 280.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 279.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 276.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 274.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 271.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 270.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 269.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 268.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 267.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 267.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 267.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 266.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 266.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 266.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 264.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 264.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 264.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 264.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 263.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 261.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 260.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 260.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 260.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 260.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 259.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 258.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 258.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 257.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 256.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 255.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 255.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 255.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 252.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 252.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 251.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 251.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 250.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 249.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 248.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 247.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 246.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 246.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 245.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 244.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 244.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 243.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 243.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 242.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 242.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 241.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 240.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 240.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 240.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 239.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 239.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 238.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 237.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 237.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 235.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 235.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 234.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 233.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 233.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 232.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 230.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 230.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 230.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 230.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 230.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 229.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 228.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 227.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 225.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 225.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 225.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 224.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 223.3
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 222.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 222.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 222.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 221.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 220.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 219.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 218.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 218.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 217.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 217.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 217.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 216.0
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 215.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 215.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 215.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 212.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 212.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 211.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 210.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 209.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 208.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 208.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 208.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 207.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 207.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 205.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 205.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 204.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 204.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 204.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 204.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 204.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 202.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 202.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 201.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 200.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 200.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 200.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 200.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 198.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 198.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 198.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 197.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 197.7
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 197.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 196.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 195.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 195.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 194.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 194.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 193.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 192.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 192.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 191.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 190.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 189.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 189.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 188.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 187.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 186.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 185.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 185.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 184.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 184.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 183.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 183.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 182.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 181.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 181.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 180.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 180.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 179.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 179.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 179.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 178.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 178.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 176.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 175.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 175.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 174.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 174.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 172.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 172.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 168.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 166.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 166.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 165.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 164.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 163.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 162.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 162.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 161.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 157.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 156.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 155.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 153.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 152.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 151.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 151.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 150.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 150.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 150.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 148.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 146.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 146.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 145.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 142.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 140.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 140.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 139.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 138.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 137.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 112.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 86.7
Samples: 4

Max nTPM: 94.2
Min nTPM: 80.5
Sample A Female 94.2
Sample B Female 89.9
Sample C Male 82.3
Sample D Male 80.5

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