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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1536.6 nTPM
HPA:1536.6 nTPM
GTEx:1043.9 nTPM
FANTOM5:57.3 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA068418
Glandular cells Low



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1536.6
overview
Female, age 68
Salivary gland sample 216
nTPM: 1526.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1462.5
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1620.6
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1043.9
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1043.9
Samples: 181

Max nTPM: 2095.6
Min nTPM: 651.5
Std nTPM: 210.4
Median nTPM: 1007.1
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 2095.6
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 1954.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 1674.8
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 1670.1
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 1665.9
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 1538.0
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 1462.7
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1457.3
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 1448.2
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 1436.5
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1391.6
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1383.7
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1382.0
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1374.5
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1356.4
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1316.8
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1310.8
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1309.5
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1282.9
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1263.0
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1255.4
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1238.2
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1237.8
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1237.7
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1225.0
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1219.5
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1214.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1194.9
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1190.5
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1190.4
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 1181.3
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1180.2
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1173.1
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1172.7
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1171.4
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1166.5
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1166.5
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1158.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1153.1
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1149.8
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1149.0
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1145.4
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1142.5
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1141.5
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1137.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1131.4
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1130.4
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1129.0
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1125.5
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1114.5
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1112.4
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1110.0
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1108.2
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1107.4
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1105.0
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1104.2
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1102.1
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1101.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1091.4
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1086.3
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1085.6
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1084.2
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1083.3
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1076.4
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1067.4
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1065.0
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1063.6
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1061.1
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1061.0
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1059.9
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1056.6
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1056.0
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1051.4
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1049.2
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1048.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1046.6
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1041.8
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1037.7
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1037.5
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1034.5
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1032.1
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1031.3
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1028.4
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1026.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1025.6
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1023.6
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1021.7
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1017.6
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1010.4
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1008.1
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1007.1
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1005.4
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1004.1
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1001.0
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1000.6
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 997.1
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 990.0
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 987.8
GTEX-13113-1526-SM-5EGHV 60-69 years, female 987.1
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 986.9
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 981.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 980.3
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 980.2
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 979.2
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 972.8
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 972.4
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 969.4
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 968.9
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 964.2
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 963.9
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 962.5
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 962.3
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 961.5
GTEX-1445S-2926-SM-5O993 60-69 years, male 961.3
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 960.5
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 960.2
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 956.6
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 954.0
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 953.9
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 952.4
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 951.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 949.7
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 945.5
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 939.0
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 937.9
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 934.7
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 934.1
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 929.1
GTEX-11P82-0926-SM-5986X 20-29 years, male 925.5
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 918.7
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 915.5
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 907.0
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 902.7
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 900.3
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 900.2
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 897.2
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 897.1
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 897.0
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 896.2
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 882.1
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 879.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 879.0
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 874.0
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 872.0
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 868.4
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 868.3
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 868.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 867.8
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 866.0
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 863.5
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 863.0
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 862.7
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 857.4
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 854.9
GTEX-1B932-0626-SM-731EM 40-49 years, female 854.1
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 854.1
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 851.2
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 850.1
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 842.9
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 838.7
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 838.4
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 838.4
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 836.6
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 835.8
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 830.6
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 829.9
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 822.1
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 819.7
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 818.7
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 815.8
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 812.6
GTEX-13O21-1926-SM-5MR39 50-59 years, male 805.4
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 804.2
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 798.5
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 798.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 771.2
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 764.9
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 734.8
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 732.1
GTEX-178AV-1426-SM-6LLID 40-49 years, male 681.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 651.5
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

57.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 57.3
FF:10199-103F1 23 years, male 57.3
Salivary gland
Scaled Tags Per Million: 34.5
FF:10093-102C3 16-60 years, mixed 34.5
Submaxillary gland
Scaled Tags Per Million: 28.3
FF:10202-103F4 24 years, male 28.3

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