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RPL6
HPA
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  • RPL6
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
Tissue methods
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:943.1 nTPM
HPA:713.0 nTPM
GTEx:943.1 nTPM
FANTOM5:30.7 Scaled Tags Per Million
SMALL INTESTINE - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA068418
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

713.0
overview
Male, age 65
Small intestine sample 232
nTPM: 829
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 727.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 654.5
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 641.5

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

943.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 943.1
Samples: 207

Max nTPM: 1839.6
Min nTPM: 399.6
Std nTPM: 270.8
Median nTPM: 925.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 1839.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1826.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1764.0
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1752.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1722.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1630.3
GTEX-1RQED-2826-SM-HLJQK 60-69 years, male 1576.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 1456.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1450.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1450.0
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1428.3
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1414.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1389.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1385.1
GTEX-1HKZK-2226-SM-GA91V 40-49 years, male 1361.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1336.0
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1326.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1325.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1317.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1295.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1263.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1245.3
GTEX-1PFEY-1326-SM-HK791 30-39 years, male 1242.3
GTEX-1M5QR-2226-SM-HLJRV 40-49 years, male 1241.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1237.6
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1235.4
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1226.6
GTEX-1192X-2526-SM-59868 50-59 years, male 1223.3
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1216.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1211.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1208.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1206.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1189.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1183.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1181.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1174.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1172.4
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1163.8
GTEX-XPT6-1026-SM-GOQYN 20-29 years, male 1160.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1156.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1156.0
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1153.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1152.0
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1150.7
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1147.9
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1141.7
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1138.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1126.4
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1124.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1118.2
GTEX-W5X1-1926-SM-GOQYX 40-49 years, female 1102.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1094.0
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1086.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1082.1
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1077.8
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1072.1
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1070.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1064.7
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1064.7
GTEX-1HSGN-2126-SM-GA8ZB 40-49 years, female 1064.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1061.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1052.8
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1051.4
GTEX-WHPG-1826-SM-GNTAH 50-59 years, male 1046.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1042.3
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1041.1
GTEX-ZPU1-1826-SM-GNTB3 40-49 years, male 1037.7
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1037.5
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1036.5
GTEX-1MCYP-1626-SM-HLJQ5 20-29 years, female 1027.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 1024.1
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1023.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1023.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1013.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1010.0
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1004.5
GTEX-13X6H-1826-SM-5O9D1 50-59 years, female 1004.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1003.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1001.2
GTEX-14PKU-1626-SM-6871C 40-49 years, female 991.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 981.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 978.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 976.7
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 976.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 972.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 972.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 971.1
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 966.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 964.7
GTEX-1HCUA-1726-SM-GA8Z2 50-59 years, female 964.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 960.6
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 959.1
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 957.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 953.5
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 948.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 948.6
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 944.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 936.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 934.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 931.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 929.7
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 927.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 925.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 925.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 920.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 920.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 915.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 909.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 907.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 907.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 900.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 899.4
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 893.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 891.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 890.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 882.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 871.5
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 864.2
GTEX-178AV-1226-SM-GOR11 40-49 years, male 864.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 863.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 858.5
GTEX-YJ8A-2126-SM-GQ1C7 20-29 years, male 855.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 854.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 847.5
GTEX-YB5K-1126-SM-H6Q6O 40-49 years, female 842.8
GTEX-ZV7C-1426-SM-GNTB8 50-59 years, male 842.8
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 839.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 839.3
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 838.7
GTEX-U8XE-2226-SM-HAUZQ 30-39 years, male 836.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 829.7
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 826.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 824.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 822.2
GTEX-X4LF-1326-SM-HLJSD 50-59 years, male 820.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 820.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 818.4
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 815.2
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 805.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 804.2
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 803.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 801.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 796.4
GTEX-1NHNU-2526-SM-HK79M 50-59 years, male 795.2
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 794.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 785.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 773.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 764.3
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 763.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 759.0
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 758.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 757.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 752.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 748.7
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 736.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 733.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 732.8
GTEX-1MA7W-0726-SM-HLJQU 20-29 years, female 732.4
GTEX-144GM-1026-SM-5O9AZ 20-29 years, male 731.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 728.1
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 720.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 719.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 719.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 716.7
GTEX-X3Y1-1526-SM-H6Q6X 40-49 years, male 709.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 708.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 704.8
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 704.0
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 700.8
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 696.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 688.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 687.0
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 683.0
GTEX-1S831-1526-SM-HLJQS 20-29 years, male 680.2
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 679.8
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 678.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 672.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 672.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 665.2
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 664.0
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 654.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 653.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 639.2
GTEX-1HBPN-1926-SM-GA91H 50-59 years, male 637.8
GTEX-ZT9X-1026-SM-HLJS2 40-49 years, male 633.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 630.7
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 625.3
GTEX-14PN3-2026-SM-68729 60-69 years, female 624.4
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 606.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 605.2
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 601.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 597.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 588.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 583.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 567.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 557.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 554.4
GTEX-YFCO-1326-SM-664NV 40-49 years, male 553.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 534.8
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 531.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 527.6
GTEX-1122O-1326-SM-5H11F 60-69 years, female 518.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 492.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 485.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 485.1
GTEX-111YS-1426-SM-5GID8 60-69 years, male 446.7
GTEX-ZTSS-0926-SM-59865 40-49 years, male 399.6
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

30.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 30.7
FF:10024-101D6 15,40,85 years, mixed 30.7

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