HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:175.1 nTPM
HPA Brain:229.1 nTPM
GTEx:175.1 nTPM
FANTOM5:246.9 Scaled Tags Per Million
Pig:138.8 nTPM
Mouse:160.6 nTPM
Allen mouse:2.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030501Antibody HPA045621
Glial cells Not detectedLow
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 229.1
Sample id Sample description nTPM
Hippocampus
nTPM: 171.7
2621 Female, age 67, right hemisphere 194.0
1898 Male, age 80, left hemisphere 183.5
2529 Female, age 94, left hemisphere 172.9
2148 Female, age 91, left hemisphere 169.0
1855 Male, age 76, left hemisphere 162.5
1911 Female, age 85, right hemisphere 148.2
Dentate gyrus
nTPM: 173.3
2530 Female, age 94, left hemisphere 206.9
1927 Female, age 91, both hemispheres 187.1
2531 Female, age 67, both hemispheres 170.7
2246 Female, age 85, both hemispheres 169.0
2010 Male, age 76, both hemispheres 153.4
2528 Male, age 74, both hemispheres 152.8
Entorhinal gyrus
nTPM: 200.0
2764 Male, age 80, right hemisphere 234.7
2613 Female, age 94, left hemisphere 223.7
1787 Male, age 76, left hemisphere 213.4
1938 Female, age 85, left hemisphere 194.5
2686 Male, age 75, right hemisphere 173.0
2117 Female, age 91, right hemisphere 160.6
Hippocampus, CA1
nTPM: 173.6
2749 Male, age 80, left hemisphere 222.6
1873 Female, age 85, both hemispheres 169.4
2082 Female, age 91, right hemisphere 159.2
2527 Male, age 74, both hemispheres 158.6
2045 Male, age 76, both hemispheres 158.2
Hippocampus, CA2
nTPM: 179.6
1892 Male, age 76, both hemispheres 208.4
2437 Female, age 94, left hemisphere 197.8
1940 Female, age 85, left hemisphere 191.5
1963 Male, age 80, left hemisphere 166.8
2113 Female, age 91, right hemisphere 161.0
2249 Male, age 74, both hemispheres 152.1
Hippocampus, CA3
nTPM: 166.1
2620 Female, age 94, left hemisphere 199.3
2861 Female, age 67, both hemispheres 197.5
1867 Male, age 76, both hemispheres 166.3
2137 Male, age 80, left hemisphere 151.9
1891 Female, age 85, both hemispheres 145.1
2436 Male, age 74, both hemispheres 136.4
Parahippocampal cortex
nTPM: 202.2
2532 Female, age 72, left hemisphere 237.0
2622 Female, age 67, right hemisphere 221.1
2245 Female, age 91, both hemispheres 219.1
1850 Male, age 80, both hemispheres 218.3
1990 Female, age 91, right hemisphere 197.7
1933 Female, age 85, both hemispheres 195.9
2693 Female, age 94, both hemispheres 195.0
2250 Female, age 67, right hemisphere 188.5
2692 Male, age 74, both hemispheres 179.8
2018 Male, age 76, both hemispheres 169.5
Perirhinal gyrus
nTPM: 229.1
1794 Male, age 80, right hemisphere 270.1
1847 Female, age 91, left hemisphere 247.1
1841 Female, age 85, right hemisphere 225.5
2521 Female, age 94, right hemisphere 207.8
2848 Male, age 76, right hemisphere 194.6
Subiculum
nTPM: 169.1
2619 Male, age 74, both hemispheres 207.7
2438 Female, age 94, left hemisphere 182.8
1977 Female, age 85, both hemispheres 180.6
1901 Male, age 80, both hemispheres 166.2
2042 Male, age 76, both hemispheres 141.6
2729 Female, age 91, right hemisphere 135.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 175.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 175.1
Samples: 255

Max nTPM: 341.8
Min nTPM: 41.5
Std nTPM: 53.3
Median nTPM: 170.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 341.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 337.7
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 316.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 315.9
GTEX-1P4AB-0011-R1b-SM-F2TAV 50-59 years, male 306.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 303.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 301.2
GTEX-1JJ6O-0011-R1b-SM-F2I2M 60-69 years, male 299.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 291.5
GTEX-ZZPT-0011-R1b-SM-GNINL 50-59 years, male 283.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 283.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 246.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 246.9
FF:10153-102I9 76 years, female 260.2
FF:10169-103B7 60 years, female 233.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 138.8
Pig sample Sample description nTPM
Subiculum
nTPM: 123.2
Samples: 4

Max nTPM: 170.5
Min nTPM: 101.5
Sample A Female 170.5
Sample B Female 113.9
Sample C Male 106.8
Sample D Male 101.5
Dorsal hippocampus
nTPM: 136.4
Samples: 4

Max nTPM: 177.1
Min nTPM: 111.5
Sample A Female 177.1
Sample B Female 136.8
Sample C Male 120.3
Sample D Male 111.5
Entorhinal cortex
nTPM: 137.5
Samples: 4

Max nTPM: 153.3
Min nTPM: 119.3
Sample A Female 147.9
Sample B Female 153.3
Sample C Male 129.5
Sample D Male 119.3
Ventral hippocampus
nTPM: 138.8
Samples: 4

Max nTPM: 168.8
Min nTPM: 100.9
Sample A Female 168.8
Sample B Female 100.9
Sample C Male 166.9
Sample D Male 118.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 160.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 160.6
Samples: 4

Max nTPM: 189.1
Min nTPM: 140.5
Sample A Male 163.4
Sample B Male 189.1
Sample C Female 149.4
Sample D Female 140.5
Hippocampal formation
nTPM: 142.5
Samples: 4

Max nTPM: 167.8
Min nTPM: 119.6
Sample A Male 138.0
Sample B Male 144.4
Sample C Female 119.6
Sample D Female 167.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
75214942 Antisense, RP_060427_01_A10, Mouse strain C57BL/6J (56 days, male) 2.4

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