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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:115.6 nTPM
HPA Brain:529.0 nTPM
GTEx:115.6 nTPM
Pig:339.8 nTPM
Mouse:331.7 nTPM
Allen mouse:2.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

529.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 77.2
2226 Male, age 75, left hemisphere 109.1
1961 Female, age 42, unknown 45.3
Dorsomedial nucleus
nTPM: 198.2
2017 Female, age 42, unknown 306.7
1989 Male, age 62, unknown 211.2
2041 Female, age 72, unknown 76.6
Lateral hypothalamic area
nTPM: 324.3
2271 Male, age 75, both hemispheres 492.5
2228 Male, age 66, unknown 422.2
1791 Male, age 80, right hemisphere 232.2
2412 Male, age 62, unknown 150.1
Mammillary body
nTPM: 529.0
1945 Male, age 80, right hemisphere 655.0
1948 Female, age 72, unknown 558.5
1923 Female, age 72, unknown 514.7
2413 Male, age 66, unknown 458.4
1834 Female, age 42, unknown 458.2
Paraventricular nucleus
nTPM: 314.8
2700 Male, age 62, unknown 314.8
Preoptic area
nTPM: 293.3
2414 Female, age 72, unknown 491.7
1861 Female, age 42, unknown 311.5
1907 Male, age 80, right hemisphere 76.6
Supraoptic nucleus
nTPM: 363.8
2043 Male, age 62, unknown 492.6
1894 Female, age 72, unknown 429.2
2835 Female, age 72, unknown 169.7
Ventromedial nucleus
nTPM: 58.5
1982 Female, age 72, unknown 66.4
1822 Female, age 42, unknown 50.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 115.6
Samples: 257

Max nTPM: 919.4
Min nTPM: 7.5
Std nTPM: 131.4
Median nTPM: 70.9
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 919.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 866.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 752.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 617.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 592.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 482.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 457.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 432.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 412.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 401.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 399.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 389.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 354.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 348.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 326.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 326.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 318.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 317.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 316.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 309.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 307.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 300.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 296.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 290.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 290.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 290.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 277.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 274.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 270.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 253.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 246.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 237.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 237.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 235.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 212.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 211.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 210.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 199.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 197.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 196.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 195.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 193.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 193.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 184.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 181.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 180.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 179.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 178.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 178.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 175.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 173.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 165.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 164.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 163.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 162.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 160.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 153.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 151.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 147.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 146.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 146.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 144.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 142.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 141.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 140.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 139.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 137.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 137.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 135.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 131.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 130.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 128.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 127.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 127.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 121.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 115.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 113.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 113.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 109.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 109.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 109.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 108.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 107.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 107.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 106.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 106.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 106.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 104.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 102.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 102.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 101.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 101.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 101.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 100.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 97.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 94.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 93.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 93.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 92.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 92.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 92.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 92.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 90.1
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 89.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 89.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 87.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 87.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 86.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 86.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 84.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 83.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 82.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 82.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 80.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 79.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 78.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 77.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 77.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 76.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 76.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 75.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 75.1
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 74.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 74.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 73.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 71.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 71.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 70.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 70.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 70.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 69.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 69.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 69.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 67.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 67.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 66.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 65.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 65.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 65.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 64.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 63.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 63.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 63.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 63.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 61.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 59.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 59.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 56.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 56.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 55.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 53.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 53.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 53.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 53.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 53.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 52.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 51.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 51.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 51.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 50.9
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 50.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 50.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 49.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 49.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 49.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 48.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 48.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 47.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 47.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 46.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 46.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 45.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 45.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 44.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 44.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 44.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 43.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 43.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 43.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 43.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 42.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 42.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 41.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 41.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 40.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 39.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 38.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 38.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 38.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 38.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 38.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 37.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 37.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 37.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 37.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 36.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 35.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 35.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 35.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 35.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 35.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 35.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 34.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 34.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 34.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 34.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 33.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 33.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 33.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 33.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 33.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 33.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 31.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 31.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 30.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 30.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 30.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 29.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 29.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 28.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 28.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 28.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 27.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 27.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 27.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 26.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 26.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 25.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 24.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 24.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 23.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 22.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 21.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 21.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 21.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 20.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 19.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 19.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 18.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 18.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 18.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 18.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 18.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 17.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 17.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 16.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 16.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 16.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 14.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 14.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 13.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 10.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 10.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 10.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 10.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 7.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 7.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

339.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 339.9
Samples: 4

Max nTPM: 458.3
Min nTPM: 122.5
Sample A Female 392.8
Sample B Female 458.3
Sample C Male 385.8
Sample D Male 122.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

331.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 331.7
Samples: 4

Max nTPM: 395.0
Min nTPM: 248.8
Sample A Male 248.8
Sample B Male 298.7
Sample C Female 384.4
Sample D Female 395.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.7
68795444 Antisense, RP_041130_01_F08, Mouse strain C57BL/6J (56 days, male) 2.7

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