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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
539.5
nTPM
Monaco:
429.5
nTPM
Schmiedel:
548.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
539.5
HPA sample
nTPM
gdT-cell nTPM: 485.7
Samples: 6
Max nTPM: 615.8
Min nTPM: 423.8
P10809_1007
423.8
P10809_1022
507.8
P10809_1041
615.8
P10809_1060
432.4
P10809_1077
473.8
P10809_1098
460.5
MAIT T-cell nTPM: 485.7
Samples: 6
Max nTPM: 588.7
Min nTPM: 425.4
P10809_1006
432.6
P10809_1024
588.7
P10809_1043
494.8
P10809_1062
484.5
P10809_1083
425.4
P10809_1097
488.3
Memory CD4 T-cell nTPM: 449.7
Samples: 6
Max nTPM: 477.7
Min nTPM: 403.9
P10809_1014
403.9
P10809_1026
460.7
P10809_1045
448.5
P10809_1064
457.6
P10809_1086
477.7
P10809_1113
450.0
Memory CD8 T-cell nTPM: 463.2
Samples: 5
Max nTPM: 510.5
Min nTPM: 402.1
P10809_1012
402.1
P10809_1027
510.5
P10809_1046
468.9
P10809_1065
469.7
P10809_1111
464.7
Naive CD4 T-cell nTPM: 319.5
Samples: 6
Max nTPM: 348.8
Min nTPM: 279.6
P10809_1015
279.6
P10809_1030
327.0
P10809_1049
319.4
P10809_1068
305.4
P10809_1085
348.8
P10809_1112
336.9
Naive CD8 T-cell nTPM: 397.0
Samples: 6
Max nTPM: 495.1
Min nTPM: 330.4
P10809_1016
330.4
P10809_1031
393.1
P10809_1050
385.3
P10809_1069
439.2
P10809_1087
495.1
P10809_1110
338.6
T-reg nTPM: 539.5
Samples: 6
Max nTPM: 625.2
Min nTPM: 448.9
P10809_1018
448.9
P10809_1037
567.9
P10809_1056
556.5
P10809_1075
527.6
P10809_1094
625.2
P10809_1106
510.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
429.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 276.8
Samples: 4
Max nTPM: 380.5
Min nTPM: 189.5
RHH5202_R3573
331.9
RHH5230_R3602
189.5
RHH5259_R3631
205.4
RHH5288_R3660
380.5
Effector memory CD8 T-cell nTPM: 267.0
Samples: 4
Max nTPM: 385.2
Min nTPM: 197.8
RHH5203_R3574
385.2
RHH5231_R3603
276.9
RHH5260_R3632
197.8
RHH5289_R3661
207.9
MAIT T-cell nTPM: 308.6
Samples: 4
Max nTPM: 405.4
Min nTPM: 254.9
RHH5233_R3605
298.0
RHH5205_R3576
275.9
RHH5262_R3634
254.9
RHH5297_R3663
405.4
Memory CD4 T-cell TFH nTPM: 341.0
Samples: 4
Max nTPM: 399.6
Min nTPM: 239.4
RHH5300_R3666
341.5
RHH5236_R3608
399.6
RHH5265_R3637
239.4
RHH5208_R3579
383.6
Memory CD4 T-cell Th1 nTPM: 307.7
Samples: 4
Max nTPM: 464.6
Min nTPM: 214.5
RHH5210_R3581
311.6
RHH5302_R3668
464.6
RHH5238_R3610
239.9
RHH5267_R3639
214.5
Memory CD4 T-cell Th1/Th17 nTPM: 318.0
Samples: 4
Max nTPM: 461.8
Min nTPM: 155.2
RHH5303_R3669
461.8
RHH5211_R3582
441.5
RHH5239_R3611
155.2
RHH5268_R3640
213.6
Memory CD4 T-cell Th17 nTPM: 249.9
Samples: 4
Max nTPM: 447.6
Min nTPM: 157.1
RHH5304_R3670
237.2
RHH5212_R3583
447.6
RHH5240_R3612
157.8
RHH5269_R3641
157.1
Memory CD4 T-cell Th2 nTPM: 300.4
Samples: 4
Max nTPM: 361.0
Min nTPM: 194.2
RHH5305_R3671
327.1
RHH5213_R3584
319.2
RHH5241_R3613
361.0
RHH5270_R3642
194.2
Naive CD4 T-cell nTPM: 218.1
Samples: 4
Max nTPM: 325.9
Min nTPM: 127.5
RHH5306_R3672
215.0
RHH5214_R3585
325.9
RHH5242_R3614
204.1
RHH5271_R3643
127.5
Naive CD8 T-cell nTPM: 192.0
Samples: 4
Max nTPM: 242.0
Min nTPM: 133.3
RHH5201_R3572
242.0
RHH5229_R3601
133.3
RHH5258_R3630
225.9
RHH5287_R3659
166.7
Non-Vd2 gdTCR nTPM: 331.1
Samples: 4
Max nTPM: 472.4
Min nTPM: 198.0
RHH5235_R3607
198.0
RHH5264_R3636
334.3
RHH5207_R3578
319.7
RHH5299_R3665
472.4
T-reg nTPM: 267.7
Samples: 4
Max nTPM: 365.9
Min nTPM: 163.3
RHH5301_R3667
365.9
RHH5237_R3609
300.7
RHH5266_R3638
163.3
RHH5209_R3580
240.9
Terminal effector memory CD4 T-cell nTPM: 257.6
Samples: 2
Max nTPM: 328.1
Min nTPM: 187.1
RHH5243_R3615
187.1
RHH5272_R3644
328.1
Terminal effector memory CD8 T-cell nTPM: 429.5
Samples: 4
Max nTPM: 740.9
Min nTPM: 245.1
RHH5232_R3604
308.8
RHH5204_R3575
740.9
RHH5261_R3633
245.1
RHH5296_R3662
423.2
Vd2 gdTCR nTPM: 420.5
Samples: 4
Max nTPM: 685.1
Min nTPM: 232.3
RHH5234_R3606
297.6
RHH5206_R3577
685.1
RHH5263_R3635
232.3
RHH5298_R3664
466.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.