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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • ACO2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

126.457
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:86.9 nTPM
HPA Brain:172.7 nTPM
GTEx:86.9 nTPM
Pig:106.0 nTPM
Mouse:347.5 nTPM
Allen mouse:12.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA001097
Hypothalamus mean intensity 126.457
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 26.214
Periventricular hypothalamic nucleus 126.457
Supraoptic nucleus -
Tuberal nucleus 36.685
Ventral tuberomammillary nucleus 34.156
Lateral preoptic area 11.235
Medial preoptic area 33.878
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus -
Anterior hypothalamic area, central -
Ventral medial hypothalamic nucleus 61.713
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 49.495
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 26.009
Dorsal medial hypothalamic nucleus 39.567
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 87.2
2226 Male, age 75, left hemisphere 89.8
1961 Female, age 42, unknown 84.5
Dorsomedial nucleus
nTPM: 134.7
1989 Male, age 62, unknown 203.1
2017 Female, age 42, unknown 105.6
2041 Female, age 72, unknown 95.5
Lateral hypothalamic area
nTPM: 120.4
1791 Male, age 80, right hemisphere 158.8
2271 Male, age 75, both hemispheres 113.7
2412 Male, age 62, unknown 110.7
2228 Male, age 66, unknown 98.4
Mammillary body
nTPM: 172.7
1923 Female, age 72, unknown 241.1
2413 Male, age 66, unknown 173.0
1834 Female, age 42, unknown 160.1
1948 Female, age 72, unknown 150.6
1945 Male, age 80, right hemisphere 138.5
Paraventricular nucleus
nTPM: 88.5
2700 Male, age 62, unknown 88.5
Preoptic area
nTPM: 113.0
1861 Female, age 42, unknown 130.1
1907 Male, age 80, right hemisphere 111.3
2414 Female, age 72, unknown 97.6
Supraoptic nucleus
nTPM: 125.5
1894 Female, age 72, unknown 149.9
2835 Female, age 72, unknown 118.4
2043 Male, age 62, unknown 108.4
Ventromedial nucleus
nTPM: 79.6
1982 Female, age 72, unknown 84.1
1822 Female, age 42, unknown 75.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 86.9
Samples: 257

Max nTPM: 237.4
Min nTPM: 32.0
Std nTPM: 27.0
Median nTPM: 83.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 237.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 216.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 167.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 165.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 146.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 144.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 142.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 140.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 137.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 136.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 136.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 135.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 134.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 134.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 132.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 132.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 131.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 129.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 128.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 127.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 127.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 127.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 126.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 126.1
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 125.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 123.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 123.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 120.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 119.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 119.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 117.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 116.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 113.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 112.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 111.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 111.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 111.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 110.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 110.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 110.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 109.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 108.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 108.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 108.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 107.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 106.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 106.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 106.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 105.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 105.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 105.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 105.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 105.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 104.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 103.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 102.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 102.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 102.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 102.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 101.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 100.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 100.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 100.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 99.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 99.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 99.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 99.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 98.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 98.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 97.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 96.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 96.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 96.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 96.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 96.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 95.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 95.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 95.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 94.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 94.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 94.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 93.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 93.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 93.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 93.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 93.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 92.7
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 92.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 92.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 91.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 91.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 91.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 90.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 90.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 90.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 90.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 90.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 90.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 89.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 89.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 89.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 89.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 88.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 88.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 88.9
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 88.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 88.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 88.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 88.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 88.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 87.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 87.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 87.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 87.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 86.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 86.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 86.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 86.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 86.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 85.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 85.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 85.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 84.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 84.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 84.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 84.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 84.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 83.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 83.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 83.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 83.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 83.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 82.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 82.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 81.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 81.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 81.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 80.9
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 80.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 80.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 80.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 79.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 79.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 79.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 79.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 79.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 79.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 79.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 78.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 78.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 78.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 78.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 78.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 78.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 78.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 78.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 77.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 77.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 76.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 76.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 76.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 76.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 76.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 76.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 75.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 75.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 75.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 75.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 75.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 75.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 74.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 74.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 74.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 74.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 74.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 73.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 73.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 73.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 73.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 72.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 72.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 72.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 71.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 71.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 71.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 71.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 71.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 70.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 70.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 70.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 69.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 69.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 69.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 69.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 69.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 69.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 68.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 68.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 68.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 68.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 67.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 67.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 67.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 66.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 66.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 66.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 65.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 65.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 65.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 65.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 63.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 63.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 63.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 62.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 62.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 61.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 61.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 61.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 61.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 61.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 60.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 60.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 60.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 59.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 59.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 57.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 57.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 56.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 55.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 55.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 54.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 54.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 53.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 53.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 52.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 52.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 52.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 52.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 52.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 50.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 50.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 50.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 49.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 49.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 48.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 48.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 48.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 47.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 46.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 45.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 44.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 41.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 40.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 39.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 32.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 106.0
Samples: 4

Max nTPM: 126.7
Min nTPM: 70.4
Sample A Female 126.7
Sample B Female 125.5
Sample C Male 101.4
Sample D Male 70.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

347.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 347.5
Samples: 4

Max nTPM: 361.2
Min nTPM: 324.6
Sample A Male 324.6
Sample B Male 361.2
Sample C Female 349.8
Sample D Female 354.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.2
67978674 Antisense, RP_040923_01_E08, Mouse strain C57BL/6J (56 days, male) 12.2

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