A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
212.5
nTPM
Monaco:
723.8
nTPM
Schmiedel:
446.5
TPM
MONOCYTES - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
212.5
HPA sample
nTPM
Classical monocyte nTPM: 187.6
Samples: 6
Max nTPM: 285.8
Min nTPM: 141.7
P10809_1003
285.8
P10809_1020
245.4
P10809_1039
159.6
P10809_1058
148.4
P10809_1080
144.5
P10809_1107
141.7
Intermediate monocyte nTPM: 212.5
Samples: 6
Max nTPM: 335.8
Min nTPM: 150.9
P10809_1004
217.1
P10809_1023
335.8
P10809_1042
171.2
P10809_1061
150.9
P10809_1081
164.6
P10809_1108
235.3
Non-classical monocyte nTPM: 188.3
Samples: 5
Max nTPM: 229.1
Min nTPM: 154.7
P10809_1005
229.1
P10809_1053
154.7
P10809_1072
209.0
P10809_1082
156.7
P10809_1109
192.1
MONOCYTES - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
723.8
Monaco sample
nTPM
Classical monocyte nTPM: 692.5
Samples: 4
Max nTPM: 738.3
Min nTPM: 636.0
RHH5313_R3680
636.0
RHH5221_R3593
660.6
RHH5250_R3622
738.3
RHH5279_R3651
735.0
Intermediate monocyte nTPM: 723.8
Samples: 4
Max nTPM: 974.0
Min nTPM: 537.0
RHH5314_R3681
763.9
RHH5222_R3594
537.0
RHH5251_R3623
620.3
RHH5280_R3652
974.0
Non-classical monocyte nTPM: 667.7
Samples: 4
Max nTPM: 800.7
Min nTPM: 519.9
RHH5315_R3682
687.0
RHH5223_R3595
519.9
RHH5252_R3624
663.1
RHH5281_R3653
800.7
MONOCYTES - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
446.5
Schmiedel sample id
TPM
Classical monocyte TPM: 387.0
Samples: 91
Max TPM: 501.8
Min TPM: 301.5
MONOCYTES_1
501.8
MONOCYTES_2
471.4
MONOCYTES_3
462.8
MONOCYTES_4
460.0
MONOCYTES_5
458.4
MONOCYTES_6
454.2
MONOCYTES_7
447.8
MONOCYTES_8
447.5
MONOCYTES_9
446.1
MONOCYTES_10
439.5
MONOCYTES_11
433.4
MONOCYTES_12
432.8
MONOCYTES_13
431.4
MONOCYTES_14
430.4
MONOCYTES_15
430.2
MONOCYTES_16
429.8
MONOCYTES_17
429.0
MONOCYTES_18
427.9
MONOCYTES_19
426.9
MONOCYTES_20
425.3
MONOCYTES_21
421.5
MONOCYTES_22
417.1
MONOCYTES_23
414.1
MONOCYTES_24
412.2
MONOCYTES_25
408.1
MONOCYTES_26
407.5
MONOCYTES_27
406.7
MONOCYTES_28
406.6
MONOCYTES_29
403.2
MONOCYTES_30
402.9
MONOCYTES_31
399.7
MONOCYTES_32
396.6
MONOCYTES_33
395.7
MONOCYTES_34
392.0
MONOCYTES_35
391.4
MONOCYTES_36
391.0
MONOCYTES_37
390.1
MONOCYTES_38
390.0
MONOCYTES_39
389.9
MONOCYTES_40
389.7
MONOCYTES_41
389.1
MONOCYTES_42
389.1
MONOCYTES_43
388.9
MONOCYTES_44
388.2
MONOCYTES_45
387.6
MONOCYTES_46
386.1
MONOCYTES_47
385.9
MONOCYTES_48
385.0
MONOCYTES_49
383.2
MONOCYTES_50
382.9
MONOCYTES_51
382.9
MONOCYTES_52
382.6
MONOCYTES_53
381.6
MONOCYTES_54
379.7
MONOCYTES_55
379.2
MONOCYTES_56
378.3
MONOCYTES_57
376.2
MONOCYTES_58
375.7
MONOCYTES_59
370.5
MONOCYTES_60
369.7
MONOCYTES_61
369.6
MONOCYTES_62
369.6
MONOCYTES_63
369.4
MONOCYTES_64
366.6
MONOCYTES_65
365.8
MONOCYTES_66
365.3
MONOCYTES_67
363.5
MONOCYTES_68
361.3
MONOCYTES_69
354.0
MONOCYTES_70
353.9
MONOCYTES_71
351.9
MONOCYTES_72
350.9
MONOCYTES_73
349.6
MONOCYTES_74
349.2
MONOCYTES_75
348.8
MONOCYTES_76
348.6
MONOCYTES_77
347.1
MONOCYTES_78
346.6
MONOCYTES_79
342.7
MONOCYTES_80
340.1
MONOCYTES_81
339.3
MONOCYTES_82
330.6
MONOCYTES_83
329.6
MONOCYTES_84
327.6
MONOCYTES_85
327.0
MONOCYTES_86
325.5
MONOCYTES_87
325.1
MONOCYTES_88
320.9
MONOCYTES_89
315.0
MONOCYTES_90
309.4
MONOCYTES_91
301.5
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Non-classical monocyte TPM: 446.5
Samples: 90
Max TPM: 581.8
Min TPM: 349.9
M2_1
581.8
M2_2
569.8
M2_3
557.8
M2_4
551.1
M2_5
535.8
M2_6
517.9
M2_7
512.2
M2_8
512.0
M2_9
505.8
M2_10
504.8
M2_11
501.1
M2_12
497.7
M2_13
496.0
M2_14
495.1
M2_15
493.5
M2_16
490.9
M2_17
490.8
M2_18
490.2
M2_19
490.2
M2_20
485.8
M2_21
483.0
M2_22
482.8
M2_23
482.3
M2_24
481.2
M2_25
478.6
M2_26
474.0
M2_27
471.4
M2_28
468.5
M2_29
467.7
M2_30
466.7
M2_31
462.5
M2_32
461.7
M2_33
460.7
M2_34
457.6
M2_35
455.7
M2_36
455.2
M2_37
454.4
M2_38
453.3
M2_39
453.0
M2_40
452.4
M2_41
447.8
M2_42
447.6
M2_43
446.9
M2_44
439.5
M2_45
438.1
M2_46
437.2
M2_47
436.2
M2_48
435.9
M2_49
435.4
M2_50
435.3
M2_51
433.1
M2_52
431.3
M2_53
430.6
M2_54
429.6
M2_55
429.5
M2_56
426.0
M2_57
422.6
M2_58
422.1
M2_59
422.1
M2_60
421.9
M2_61
421.4
M2_62
419.6
M2_63
418.6
M2_64
418.4
M2_65
416.4
M2_66
416.4
M2_67
415.5
M2_68
415.4
M2_69
413.8
M2_70
411.4
M2_71
410.5
M2_72
408.2
M2_73
406.2
M2_74
404.6
M2_75
400.3
M2_76
398.0
M2_77
397.5
M2_78
396.1
M2_79
394.7
M2_80
389.8
M2_81
386.0
M2_82
384.3
M2_83
384.0
M2_84
381.3
M2_85
380.6
M2_86
377.9
M2_87
371.3
M2_88
364.8
M2_89
364.1
M2_90
349.9
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