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  • TISSUE

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  • RPS19
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:978.9 nTPM
HPA Brain:565.6 nTPM
GTEx:978.9 nTPM
Pig:586.8 nTPM
Mouse:516.9 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

565.6
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 397.9
1961 Female, age 42, unknown 431.4
2226 Male, age 75, left hemisphere 364.4
Dorsomedial nucleus
nTPM: 421.6
2017 Female, age 42, unknown 451.3
2041 Female, age 72, unknown 414.5
1989 Male, age 62, unknown 399.1
Lateral hypothalamic area
nTPM: 472.1
2412 Male, age 62, unknown 496.5
1791 Male, age 80, right hemisphere 472.8
2228 Male, age 66, unknown 469.0
2271 Male, age 75, both hemispheres 450.1
Mammillary body
nTPM: 460.6
1834 Female, age 42, unknown 514.6
1948 Female, age 72, unknown 485.1
1945 Male, age 80, right hemisphere 470.6
1923 Female, age 72, unknown 418.1
2413 Male, age 66, unknown 414.4
Paraventricular nucleus
nTPM: 423.5
2700 Male, age 62, unknown 423.5
Preoptic area
nTPM: 406.4
1861 Female, age 42, unknown 468.6
2414 Female, age 72, unknown 414.0
1907 Male, age 80, right hemisphere 336.6
Supraoptic nucleus
nTPM: 565.6
1894 Female, age 72, unknown 607.9
2043 Male, age 62, unknown 602.7
2835 Female, age 72, unknown 486.3
Ventromedial nucleus
nTPM: 459.3
1982 Female, age 72, unknown 490.8
1822 Female, age 42, unknown 427.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

978.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 978.9
Samples: 257

Max nTPM: 4055.0
Min nTPM: 275.5
Std nTPM: 446.0
Median nTPM: 881.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 4055.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2922.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2839.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2560.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2424.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2223.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 1999.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1971.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1958.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1895.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1831.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1814.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1782.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1754.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1648.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1637.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1637.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1564.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1540.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1534.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1521.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1513.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1494.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1485.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1480.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1473.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1467.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1454.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1443.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1430.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1430.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1412.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1387.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1383.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1352.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1352.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1348.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1337.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1336.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1336.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1332.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1328.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1320.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1318.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1306.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1281.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1276.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1271.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1271.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1265.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1253.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1253.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1248.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1240.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1238.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1238.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1227.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1220.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1204.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1203.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1198.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1171.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1170.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1168.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1161.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1148.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1141.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1131.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 1127.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1117.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1110.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1109.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1098.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1091.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1079.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1069.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1068.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1056.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1056.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1050.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1048.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1044.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1039.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1032.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1031.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1028.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1028.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1014.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1004.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 996.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 995.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 994.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 991.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 991.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 979.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 978.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 970.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 965.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 962.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 960.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 956.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 954.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 944.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 943.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 940.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 936.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 933.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 931.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 928.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 926.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 925.7
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 924.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 921.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 918.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 917.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 916.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 915.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 913.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 910.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 906.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 900.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 896.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 895.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 894.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 892.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 891.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 881.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 881.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 881.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 880.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 876.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 875.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 873.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 862.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 860.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 850.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 841.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 841.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 840.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 833.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 832.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 831.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 830.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 828.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 824.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 823.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 819.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 817.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 815.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 814.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 814.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 813.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 809.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 794.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 789.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 789.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 789.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 788.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 788.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 787.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 785.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 780.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 778.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 777.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 774.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 768.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 767.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 766.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 766.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 764.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 762.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 758.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 756.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 752.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 752.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 749.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 746.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 738.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 730.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 728.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 728.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 723.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 723.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 722.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 719.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 718.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 712.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 705.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 702.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 701.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 700.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 696.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 695.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 692.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 690.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 689.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 689.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 686.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 684.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 682.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 680.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 678.3
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 676.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 674.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 673.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 665.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 665.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 657.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 657.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 651.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 649.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 647.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 644.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 636.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 634.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 633.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 628.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 624.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 623.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 618.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 617.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 614.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 611.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 606.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 596.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 595.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 591.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 589.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 589.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 583.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 570.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 557.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 556.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 556.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 551.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 546.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 538.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 532.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 530.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 524.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 524.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 521.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 518.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 507.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 503.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 497.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 496.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 490.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 479.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 477.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 461.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 449.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 446.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 436.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 426.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 368.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 275.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

586.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 586.9
Samples: 4

Max nTPM: 836.4
Min nTPM: 354.9
Sample A Female 836.4
Sample B Female 587.5
Sample C Male 568.6
Sample D Male 354.9

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

516.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 517.0
Samples: 4

Max nTPM: 615.1
Min nTPM: 478.0
Sample A Male 481.1
Sample B Male 615.1
Sample C Female 493.6
Sample D Female 478.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.1
72081492 Antisense, RP_051017_01_C08, Mouse strain C57BL/6J (56 days, male) 5.8
68633443 Antisense, RP_050125_02_H03, Mouse strain C57BL/6J (56 days, male) 4.4

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