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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
432.8
nTPM
FANTOM5:
283.7
Scaled Tags Per Million
Pig:
328.9
nTPM
Allen mouse:
0.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
432.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 323.0
2301
Female, age 85, both hemispheres
345.1
2188
Female, age 91, both hemispheres
327.6
2090
Male, age 80, both hemispheres
312.9
1984
Male, age 76, both hemispheres
306.3
Dorsal cochlear nucleus nTPM: 368.7
2802
Male, age 74, right hemisphere
415.4
2370
Male, age 61, both hemispheres
380.8
2058
Male, age 76, both hemispheres
363.2
2187
Female, age 91, both hemispheres
361.4
2378
Male, age 80, both hemispheres
322.6
Dorsal tegmental nucleus nTPM: 356.1
2083
Male, age 80, both hemispheres
388.7
2358
Male, age 61, both hemispheres
375.9
1936
Male, age 76, left hemisphere
336.2
2326
Male, age 74, both hemispheres
323.4
Dorsolateral tegmental area nTPM: 336.5
2654
Male, age 80, both hemispheres
405.7
2141
Male, age 76, both hemispheres
338.7
2751
Female, age 85, both hemispheres
326.3
2337
Male, age 61, both hemispheres
312.5
2360
Male, age 74, both hemispheres
299.2
Kolliker-Fuse nucleus nTPM: 359.1
2793
Female, age 91, left hemisphere
408.1
2163
Male, age 80, both hemispheres
361.3
2315
Male, age 76, right hemisphere
307.7
Lateral lemniscal nuclei nTPM: 387.0
2169
Male, age 76, both hemispheres
447.0
2746
Female, age 85, left hemisphere
402.9
2453
Male, age 74, right hemisphere
401.1
2036
Male, age 80, both hemispheres
344.7
2320
Female, age 91, left hemisphere
339.3
Lateral parabrachial nucleus nTPM: 376.0
2790
Male, age 61, both hemispheres
433.3
2139
Female, age 85, right hemisphere
419.3
2013
Male, age 80, both hemispheres
352.7
2792
Male, age 76, both hemispheres
298.5
Lateral vestibular nucleus nTPM: 375.8
2311
Male, age 80, both hemispheres
383.7
2184
Male, age 76, both hemispheres
367.8
Locus coeruleus nTPM: 368.2
2123
Female, age 91, both hemispheres
398.9
2720
Male, age 74, both hemispheres
389.9
2317
Female, age 72, unknown
384.7
2162
Male, age 80, both hemispheres
377.0
1980
Male, age 76, both hemispheres
366.3
2014
Male, age 55, unknown
361.8
2788
Male, age 74, unknown
298.7
Medial parabrachial nucleus nTPM: 374.6
2156
Male, age 61, both hemispheres
409.6
2170
Female, age 91, both hemispheres
382.2
2786
Male, age 76, both hemispheres
368.7
2854
Male, age 80, both hemispheres
366.3
2463
Female, age 85, right hemisphere
346.4
Medial periolivary nuclei nTPM: 392.4
2063
Male, age 76, both hemispheres
499.5
2171
Female, age 85, both hemispheres
478.7
2791
Male, age 74, right hemisphere
347.3
2458
Female, age 91, both hemispheres
327.3
2081
Male, age 80, both hemispheres
309.4
Motor facial nucleus nTPM: 417.3
2062
Male, age 76, both hemispheres
508.6
2795
Female, age 91, both hemispheres
442.6
2697
Female, age 85, both hemispheres
434.6
2327
Male, age 80, both hemispheres
401.5
2365
Male, age 74, right hemisphere
374.7
2126
Male, age 61, both hemispheres
342.1
Motor trigeminal nucleus nTPM: 389.2
2560
Male, age 74, both hemispheres
426.3
2335
Male, age 61, both hemispheres
421.5
2309
Male, age 76, both hemispheres
381.6
2079
Male, age 80, both hemispheres
361.8
2321
Female, age 91, both hemispheres
354.7
Nuclei of the trapezoid body nTPM: 431.3
2735
Female, age 85, both hemispheres
481.7
1983
Male, age 76, both hemispheres
479.2
2159
Male, age 61, both hemispheres
438.4
2166
Male, age 80, both hemispheres
379.2
2368
Female, age 91, both hemispheres
377.9
Nucleus raphe magnus nTPM: 432.8
2172
Female, age 85, both hemispheres
511.4
2160
Male, age 61, both hemispheres
505.6
2051
Male, age 76, both hemispheres
453.3
2328
Male, age 80, both hemispheres
397.1
2455
Male, age 74, both hemispheres
393.7
2459
Female, age 91, both hemispheres
335.6
Paramedian reticular nucleus nTPM: 356.9
2050
Female, age 85, both hemispheres
412.9
2313
Male, age 61, both hemispheres
387.3
2057
Male, age 80, both hemispheres
369.5
2052
Male, age 76, both hemispheres
258.0
Pedunculopontine tegmental nucleus nTPM: 348.4
1921
Female, age 85, both hemispheres
369.9
2334
Male, age 80, both hemispheres
361.3
2338
Male, age 61, both hemispheres
314.0
Pontine nuclei nTPM: 426.1
2787
Female, age 85, both hemispheres
619.5
1863
Male, age 55, unknown
505.2
1968
Male, age 76, left hemisphere
492.1
2727
Male, age 61, right hemisphere
414.6
2109
Female, age 72, unknown
389.9
2115
Male, age 80, left hemisphere
348.7
2319
Female, age 91, both hemispheres
320.6
2454
Male, age 74, left hemisphere
318.7
Pontine raphe nucleus nTPM: 407.6
2122
Female, age 85, midline
414.0
2853
Male, age 76, midline
401.2
Posteroventral cochlear nucleus nTPM: 334.3
2752
Female, age 85, both hemispheres
405.7
2371
Male, age 61, both hemispheres
393.4
2070
Male, age 76, both hemispheres
350.1
2135
Female, age 91, both hemispheres
267.5
2341
Male, age 80, both hemispheres
254.9
Principal sensory trigeminal nucleus nTPM: 387.6
2158
Male, age 61, both hemispheres
487.1
2008
Male, age 80, left hemisphere
394.5
2324
Male, age 76, both hemispheres
348.7
2367
Female, age 91, left hemisphere
320.2
Reticular pontine nucleus, caudal nTPM: 383.9
2332
Male, age 80, right hemisphere
435.2
2092
Male, age 76, both hemispheres
389.7
2559
Male, age 74, both hemispheres
360.4
2457
Female, age 91, both hemispheres
350.1
Reticular pontine nucleus, oral nTPM: 361.0
2012
Female, age 85, both hemispheres
384.3
2167
Male, age 76, both hemispheres
360.5
2361
Male, age 74, both hemispheres
359.0
2366
Female, age 91, both hemispheres
353.6
1939
Male, age 80, both hemispheres
347.8
Reticulotegmental nucleus nTPM: 379.7
2325
Male, age 76, both hemispheres
403.5
2452
Male, age 74, both hemispheres
401.2
2322
Female, age 91, both hemispheres
365.0
2333
Male, age 80, both hemispheres
349.2
Spinal trigeminal nucleus, oral nTPM: 371.0
1978
Male, age 76, both hemispheres
386.0
2164
Male, age 80, both hemispheres
376.8
2737
Female, age 85, both hemispheres
350.3
Subcoeruleus area nTPM: 376.4
2323
Female, age 91, left hemisphere
421.7
1958
Male, age 80, both hemispheres
385.1
2451
Male, age 74, both hemispheres
385.1
2089
Male, age 76, left hemisphere
380.7
2369
Female, age 85, left hemisphere
309.2
Superior olive nTPM: 398.3
1875
Female, age 85, both hemispheres
449.1
2561
Female, age 91, both hemispheres
404.1
2020
Male, age 76, both hemispheres
402.9
2329
Male, age 80, right hemisphere
390.3
2364
Male, age 74, right hemisphere
345.2
Ventral periolivary nuclei nTPM: 396.2
2165
Male, age 80, both hemispheres
436.3
2130
Female, age 85, both hemispheres
424.5
2794
Female, age 91, left hemisphere
365.1
2023
Male, age 76, both hemispheres
358.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 374.9
1959
Male, age 76, both hemispheres
405.9
2449
Male, age 74, both hemispheres
393.0
2161
Male, age 80, both hemispheres
391.6
2840
Female, age 85, both hemispheres
364.4
2359
Male, age 61, both hemispheres
356.3
2456
Female, age 91, both hemispheres
338.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
328.9
Pig sample
Sample description
nTPM
Pons nTPM: 328.9
Samples: 4
Max nTPM: 449.0
Min nTPM: 245.4
Sample A
Female
449.0
Sample B
Female
245.4
Sample C
Male
294.6
Sample D
Male
326.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.