HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:412.9 nTPM
HPA Brain:353.0 nTPM
GTEx:412.9 nTPM
FANTOM5:674.3 Scaled Tags Per Million
Pig:172.9 nTPM
Mouse:6.9 nTPM
Allen mouse:0.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000497Antibody CAB004439Antibody CAB047331
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 353.0
Sample id Sample description nTPM
Hippocampus
nTPM: 352.2
2529 Female, age 94, left hemisphere 459.3
1855 Male, age 76, left hemisphere 437.3
2621 Female, age 67, right hemisphere 327.4
1898 Male, age 80, left hemisphere 322.9
2148 Female, age 91, left hemisphere 315.6
1911 Female, age 85, right hemisphere 250.7
Dentate gyrus
nTPM: 318.4
2528 Male, age 74, both hemispheres 395.5
2010 Male, age 76, both hemispheres 383.5
2530 Female, age 94, left hemisphere 353.8
2246 Female, age 85, both hemispheres 322.6
2531 Female, age 67, both hemispheres 251.6
1927 Female, age 91, both hemispheres 203.4
Entorhinal gyrus
nTPM: 294.6
1787 Male, age 76, left hemisphere 418.6
2117 Female, age 91, right hemisphere 384.2
2686 Male, age 75, right hemisphere 275.1
1938 Female, age 85, left hemisphere 259.9
2764 Male, age 80, right hemisphere 255.4
2613 Female, age 94, left hemisphere 174.5
Hippocampus, CA1
nTPM: 326.0
2527 Male, age 74, both hemispheres 435.3
2045 Male, age 76, both hemispheres 406.0
2082 Female, age 91, right hemisphere 292.5
1873 Female, age 85, both hemispheres 259.8
2749 Male, age 80, left hemisphere 236.5
Hippocampus, CA2
nTPM: 319.6
2249 Male, age 74, both hemispheres 430.4
1940 Female, age 85, left hemisphere 368.7
2437 Female, age 94, left hemisphere 311.5
2113 Female, age 91, right hemisphere 301.6
1892 Male, age 76, both hemispheres 283.9
1963 Male, age 80, left hemisphere 221.4
Hippocampus, CA3
nTPM: 322.9
2436 Male, age 74, both hemispheres 506.8
1867 Male, age 76, both hemispheres 326.9
2620 Female, age 94, left hemisphere 316.8
2861 Female, age 67, both hemispheres 283.7
2137 Male, age 80, left hemisphere 267.1
1891 Female, age 85, both hemispheres 236.1
Parahippocampal cortex
nTPM: 309.9
2250 Female, age 67, right hemisphere 462.5
2622 Female, age 67, right hemisphere 368.2
2692 Male, age 74, both hemispheres 365.9
2018 Male, age 76, both hemispheres 353.8
2245 Female, age 91, both hemispheres 325.6
1990 Female, age 91, right hemisphere 279.2
1933 Female, age 85, both hemispheres 277.9
2532 Female, age 72, left hemisphere 250.6
1850 Male, age 80, both hemispheres 231.7
2693 Female, age 94, both hemispheres 183.9
Perirhinal gyrus
nTPM: 279.4
2848 Male, age 76, right hemisphere 342.6
1841 Female, age 85, right hemisphere 278.1
2521 Female, age 94, right hemisphere 272.9
1794 Male, age 80, right hemisphere 261.7
1847 Female, age 91, left hemisphere 241.6
Subiculum
nTPM: 353.0
2619 Male, age 74, both hemispheres 473.7
2042 Male, age 76, both hemispheres 471.8
2438 Female, age 94, left hemisphere 342.4
2729 Female, age 91, right hemisphere 309.7
1901 Male, age 80, both hemispheres 273.8
1977 Female, age 85, both hemispheres 246.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 412.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 412.9
Samples: 255

Max nTPM: 5378.0
Min nTPM: 68.1
Std nTPM: 601.7
Median nTPM: 226.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 5378.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 4888.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 3834.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 2344.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 2160.9
GTEX-1JMQL-0011-R1a-SM-F3K4U 50-59 years, female 2028.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 1963.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 1946.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1547.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 1503.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1469.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 674.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 674.3
FF:10153-102I9 76 years, female 859.4
FF:10169-103B7 60 years, female 489.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 172.9
Pig sample Sample description nTPM
Subiculum
nTPM: 172.9
Samples: 4

Max nTPM: 216.2
Min nTPM: 150.1
Sample A Female 216.2
Sample B Female 155.1
Sample C Male 150.1
Sample D Male 170.3
Dorsal hippocampus
nTPM: 126.7
Samples: 4

Max nTPM: 177.8
Min nTPM: 83.7
Sample A Female 177.8
Sample B Female 116.0
Sample C Male 129.3
Sample D Male 83.7
Entorhinal cortex
nTPM: 130.4
Samples: 4

Max nTPM: 152.3
Min nTPM: 103.8
Sample A Female 135.5
Sample B Female 129.9
Sample C Male 152.3
Sample D Male 103.8
Ventral hippocampus
nTPM: 159.2
Samples: 4

Max nTPM: 214.7
Min nTPM: 113.5
Sample A Female 168.0
Sample B Female 140.7
Sample C Male 214.7
Sample D Male 113.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.5
Sample A Male 5.5
Sample B Male 6.5
Sample C Female 7.2
Sample D Female 8.4
Hippocampal formation
nTPM: 6.3
Samples: 4

Max nTPM: 8.6
Min nTPM: 4.9
Sample A Male 5.6
Sample B Male 4.9
Sample C Female 6.0
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
73514683 Antisense, RP_051121_02_H03, Mouse strain C57BL/6J (56 days, male) 0.1
74363357 Antisense, RP_051121_02_H03, Mouse strain C57BL/6J (56 days, male) 0.0

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