HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.1 nTPM
HPA Brain:18.3 nTPM
GTEx:19.1 nTPM
FANTOM5:13.5 Scaled Tags Per Million
Pig:62.3 nTPM
Mouse:11.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041137
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.6
2621 Female, age 67, right hemisphere 21.3
2529 Female, age 94, left hemisphere 20.1
1898 Male, age 80, left hemisphere 17.2
1855 Male, age 76, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.8
2148 Female, age 91, left hemisphere 15.7
Dentate gyrus
nTPM: 15.8
2530 Female, age 94, left hemisphere 18.1
2246 Female, age 85, both hemispheres 16.7
2010 Male, age 76, both hemispheres 15.9
2531 Female, age 67, both hemispheres 14.9
2528 Male, age 74, both hemispheres 14.7
1927 Female, age 91, both hemispheres 14.3
Entorhinal gyrus
nTPM: 18.2
2686 Male, age 75, right hemisphere 19.2
2117 Female, age 91, right hemisphere 18.9
2613 Female, age 94, left hemisphere 18.9
1787 Male, age 76, left hemisphere 18.7
2764 Male, age 80, right hemisphere 18.1
1938 Female, age 85, left hemisphere 15.5
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 19.0
2527 Male, age 74, both hemispheres 16.7
2045 Male, age 76, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.9
1873 Female, age 85, both hemispheres 14.0
Hippocampus, CA2
nTPM: 14.0
2437 Female, age 94, left hemisphere 16.7
1963 Male, age 80, left hemisphere 14.7
1892 Male, age 76, both hemispheres 14.3
2113 Female, age 91, right hemisphere 13.4
2249 Male, age 74, both hemispheres 13.0
1940 Female, age 85, left hemisphere 11.9
Hippocampus, CA3
nTPM: 18.3
2861 Female, age 67, both hemispheres 24.2
2137 Male, age 80, left hemisphere 20.0
1867 Male, age 76, both hemispheres 18.1
2436 Male, age 74, both hemispheres 17.3
2620 Female, age 94, left hemisphere 17.3
1891 Female, age 85, both hemispheres 13.2
Parahippocampal cortex
nTPM: 15.9
2245 Female, age 91, both hemispheres 18.4
2622 Female, age 67, right hemisphere 18.1
2692 Male, age 74, both hemispheres 17.8
2532 Female, age 72, left hemisphere 17.1
1990 Female, age 91, right hemisphere 15.3
1850 Male, age 80, both hemispheres 15.1
2018 Male, age 76, both hemispheres 15.1
1933 Female, age 85, both hemispheres 14.2
2250 Female, age 67, right hemisphere 14.0
2693 Female, age 94, both hemispheres 14.0
Perirhinal gyrus
nTPM: 14.4
2521 Female, age 94, right hemisphere 15.9
2848 Male, age 76, right hemisphere 14.4
1794 Male, age 80, right hemisphere 14.1
1847 Female, age 91, left hemisphere 14.1
1841 Female, age 85, right hemisphere 13.4
Subiculum
nTPM: 16.7
2042 Male, age 76, both hemispheres 19.2
2619 Male, age 74, both hemispheres 18.9
2438 Female, age 94, left hemisphere 17.4
1901 Male, age 80, both hemispheres 16.6
1977 Female, age 85, both hemispheres 14.3
2729 Female, age 91, right hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 19.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.1
Samples: 197

Max nTPM: 35.1
Min nTPM: 7.0
Std nTPM: 4.6
Median nTPM: 18.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 35.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 32.1
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 30.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 30.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 30.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 28.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 28.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 28.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 28.2
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.5
FF:10153-102I9 76 years, female 19.8
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 62.3
Pig sample Sample description nTPM
Subiculum
nTPM: 53.0
Samples: 4

Max nTPM: 65.6
Min nTPM: 45.8
Sample A Female 65.6
Sample B Female 48.1
Sample C Male 52.6
Sample D Male 45.8
Dorsal hippocampus
nTPM: 62.2
Samples: 4

Max nTPM: 77.7
Min nTPM: 51.5
Sample A Female 77.7
Sample B Female 56.2
Sample C Male 63.5
Sample D Male 51.5
Entorhinal cortex
nTPM: 52.3
Samples: 4

Max nTPM: 59.9
Min nTPM: 43.0
Sample A Female 56.0
Sample B Female 43.0
Sample C Male 59.9
Sample D Male 50.4
Ventral hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 71.4
Min nTPM: 45.4
Sample A Female 51.5
Sample B Female 45.4
Sample C Male 71.4
Sample D Male 69.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.1
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.9
Sample A Male 9.2
Sample B Male 9.5
Sample C Female 7.9
Sample D Female 9.8
Hippocampal formation
nTPM: 11.2
Samples: 4

Max nTPM: 14.2
Min nTPM: 9.8
Sample A Male 10.8
Sample B Male 9.8
Sample C Female 10.0
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75198070 Antisense, RP_060502_01_F06, Mouse strain C57BL/6J (56 days, male) 0.4

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