We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RUNDC3A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RUNDC3A
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

159.854
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:112.4 nTPM
HPA Brain:132.7 nTPM
GTEx:112.4 nTPM
Pig:111.4 nTPM
Mouse:118.0 nTPM
Allen mouse:5.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA023548
Hypothalamus mean intensity 159.854
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 20.584
Periventricular hypothalamic nucleus 33.668
Supraoptic nucleus 28.875
Tuberal nucleus 12.206
Ventral tuberomammillary nucleus 16.764
Lateral preoptic area 93.725
Medial preoptic area 88.007
Suprachiasmatic nucleus 159.854
Paraventricular hypothalamic nucleus 92.889
Anterior hypothalamic area, central 44.772
Ventral medial hypothalamic nucleus 24.930
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 50.499
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 35.138
Dorsal medial hypothalamic nucleus 36.967
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 119.2
2226 Male, age 75, left hemisphere 140.3
1961 Female, age 42, unknown 98.2
Dorsomedial nucleus
nTPM: 106.4
1989 Male, age 62, unknown 153.7
2041 Female, age 72, unknown 84.4
2017 Female, age 42, unknown 81.0
Lateral hypothalamic area
nTPM: 132.7
1791 Male, age 80, right hemisphere 143.6
2271 Male, age 75, both hemispheres 141.3
2228 Male, age 66, unknown 138.8
2412 Male, age 62, unknown 107.2
Mammillary body
nTPM: 91.2
1923 Female, age 72, unknown 116.4
2413 Male, age 66, unknown 104.9
1948 Female, age 72, unknown 83.6
1945 Male, age 80, right hemisphere 78.2
1834 Female, age 42, unknown 72.9
Paraventricular nucleus
nTPM: 73.1
2700 Male, age 62, unknown 73.1
Preoptic area
nTPM: 94.6
1907 Male, age 80, right hemisphere 122.0
1861 Female, age 42, unknown 85.7
2414 Female, age 72, unknown 76.0
Supraoptic nucleus
nTPM: 76.4
2835 Female, age 72, unknown 112.5
2043 Male, age 62, unknown 59.7
1894 Female, age 72, unknown 57.0
Ventromedial nucleus
nTPM: 103.4
1982 Female, age 72, unknown 122.6
1822 Female, age 42, unknown 84.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 112.4
Samples: 257

Max nTPM: 364.2
Min nTPM: 30.0
Std nTPM: 39.5
Median nTPM: 110.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 364.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 250.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 244.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 216.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 211.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 208.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 205.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 203.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 185.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 176.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 175.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 171.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 163.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 162.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 160.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 159.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 157.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 157.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 157.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 156.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 156.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 156.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 156.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 154.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 153.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 153.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 152.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 151.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 151.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 151.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 151.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 150.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 150.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 149.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 149.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 147.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 147.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 147.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 147.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 146.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 146.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 144.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 143.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 143.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 143.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 143.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 142.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 141.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 140.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 140.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 140.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 139.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 139.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 138.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 138.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 137.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 137.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 137.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 137.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 135.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 135.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 135.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 134.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 134.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 134.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 134.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 133.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 133.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 133.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 133.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 132.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 132.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 132.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 132.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 131.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 131.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 131.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 130.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 130.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 128.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 128.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 128.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 127.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 127.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 126.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 126.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 126.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 126.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 126.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 126.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 126.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 125.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 125.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 124.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 124.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 123.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 123.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 122.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 122.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 121.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 121.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 120.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 119.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 119.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 119.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 119.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 119.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 118.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 118.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 118.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 118.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 117.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 117.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 117.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 116.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 116.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 116.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 116.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 115.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 115.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 115.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 114.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 114.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 113.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 112.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 111.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 110.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 110.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 110.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 110.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 109.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 109.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 108.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 108.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 107.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 107.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 107.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 107.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 106.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 106.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 105.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 105.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 105.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 105.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 105.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 105.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 105.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 105.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 105.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 104.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 104.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 104.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 104.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 104.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 103.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 103.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 102.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 102.8
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 102.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 101.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 101.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 99.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 99.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 99.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 98.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 98.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 97.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 97.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 96.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 95.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 95.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 95.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 95.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 94.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 94.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 93.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 93.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 93.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 93.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 93.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 92.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 92.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 92.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 92.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 91.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 91.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 91.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 91.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 89.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 89.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 89.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 88.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 85.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 84.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 84.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 83.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 83.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 83.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 82.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 82.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 82.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 82.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 80.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 80.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 79.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 79.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 78.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 78.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 77.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 77.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 77.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 76.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 76.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 75.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 75.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 75.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 75.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 74.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 72.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 72.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 71.8
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 71.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 71.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 71.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 70.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 68.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 68.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 66.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 66.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 66.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 65.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 65.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 65.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 64.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 62.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 62.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 62.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 62.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 61.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 60.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 59.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 56.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 56.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 54.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 50.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 49.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 49.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 49.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 44.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 41.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 40.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 40.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 39.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 33.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 33.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 30.0
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 111.4
Samples: 4

Max nTPM: 150.9
Min nTPM: 84.8
Sample A Female 150.9
Sample B Female 102.5
Sample C Male 107.5
Sample D Male 84.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 118.1
Samples: 4

Max nTPM: 127.8
Min nTPM: 111.8
Sample A Male 118.5
Sample B Male 127.8
Sample C Female 111.8
Sample D Female 114.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.9
68745366 Antisense, RP_050210_01_G09, Mouse strain C57BL/6J (56 days, male) 5.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo