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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:253.4 nTPM
HPA Brain:389.3 nTPM
GTEx:253.4 nTPM
Pig:272.0 nTPM
Mouse:776.7 nTPM
Allen mouse:26.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

389.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 360.3
2226 Male, age 75, left hemisphere 448.3
1961 Female, age 42, unknown 272.4
Dorsomedial nucleus
nTPM: 292.3
1989 Male, age 62, unknown 308.8
2041 Female, age 72, unknown 308.2
2017 Female, age 42, unknown 259.9
Lateral hypothalamic area
nTPM: 389.3
2228 Male, age 66, unknown 437.0
2271 Male, age 75, both hemispheres 420.7
1791 Male, age 80, right hemisphere 405.2
2412 Male, age 62, unknown 294.4
Mammillary body
nTPM: 384.4
1923 Female, age 72, unknown 523.1
1948 Female, age 72, unknown 368.8
2413 Male, age 66, unknown 357.3
1945 Male, age 80, right hemisphere 355.1
1834 Female, age 42, unknown 317.7
Paraventricular nucleus
nTPM: 311.4
2700 Male, age 62, unknown 311.4
Preoptic area
nTPM: 311.7
1907 Male, age 80, right hemisphere 349.5
2414 Female, age 72, unknown 294.2
1861 Female, age 42, unknown 291.5
Supraoptic nucleus
nTPM: 389.0
1894 Female, age 72, unknown 480.3
2043 Male, age 62, unknown 378.5
2835 Female, age 72, unknown 308.3
Ventromedial nucleus
nTPM: 310.8
1982 Female, age 72, unknown 332.7
1822 Female, age 42, unknown 288.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

253.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 253.4
Samples: 257

Max nTPM: 597.1
Min nTPM: 112.6
Std nTPM: 74.1
Median nTPM: 246.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 597.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 562.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 533.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 527.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 469.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 466.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 408.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 405.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 402.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 399.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 397.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 395.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 393.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 389.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 383.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 369.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 368.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 367.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 361.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 360.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 352.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 351.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 348.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 345.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 342.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 341.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 338.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 337.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 336.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 334.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 334.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 333.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 332.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 332.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 327.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 319.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 318.5
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 315.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 312.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 311.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 309.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 308.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 305.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 304.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 301.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 298.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 298.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 298.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 298.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 297.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 297.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 296.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 296.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 295.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 292.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 291.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 290.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 290.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 290.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 289.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 289.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 287.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 287.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 286.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 285.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 284.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 284.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 284.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 283.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 282.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 282.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 281.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 281.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 281.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 280.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 278.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 278.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 277.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 276.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 276.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 275.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 274.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 274.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 273.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 272.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 271.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 269.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 269.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 268.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 268.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 268.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 268.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 267.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 267.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 267.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 266.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 266.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 266.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 265.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 265.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 264.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 263.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 263.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 261.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 260.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 260.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 259.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 259.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 258.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 258.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 258.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 257.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 257.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 256.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 255.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 255.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 253.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 251.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 251.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 250.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 249.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 249.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 249.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 248.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 248.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 247.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 246.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 246.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 246.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 246.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 243.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 243.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 243.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 242.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 241.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 241.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 241.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 240.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 240.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 240.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 240.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 240.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 239.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 239.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 239.1
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 238.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 235.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 235.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 235.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 235.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 233.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 232.9
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 232.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 232.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 231.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 230.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 228.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 228.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 227.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 227.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 227.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 227.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 226.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 225.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 224.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 224.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 223.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 223.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 223.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 221.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 220.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 220.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 220.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 220.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 218.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 216.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 216.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 216.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 215.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 214.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 213.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 213.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 212.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 212.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 211.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 208.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 208.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 207.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 207.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 206.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 206.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 205.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 204.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 204.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 204.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 204.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 201.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 200.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 198.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 197.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 197.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 196.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 196.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 195.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 195.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 191.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 191.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 189.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 188.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 188.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 188.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 188.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 185.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 184.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 184.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 183.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 181.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 181.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 181.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 179.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 179.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 178.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 177.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 177.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 176.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 175.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 174.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 174.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 173.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 173.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 173.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 171.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 169.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 169.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 168.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 168.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 167.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 165.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 165.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 163.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 161.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 159.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 158.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 158.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 158.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 156.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 155.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 148.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 141.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 140.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 135.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 128.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 124.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 122.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 121.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 119.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 112.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 272.0
Samples: 4

Max nTPM: 339.8
Min nTPM: 209.0
Sample A Female 339.8
Sample B Female 295.9
Sample C Male 243.3
Sample D Male 209.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

776.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 776.8
Samples: 4

Max nTPM: 834.9
Min nTPM: 725.0
Sample A Male 742.3
Sample B Male 834.9
Sample C Female 804.8
Sample D Female 725.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

26.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 26.9
67752306 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 27.9
77620375 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 25.9
77413696 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 24.1
68196968 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 22.7

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