We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
363.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 305.1
2411
Female, age 72, unknown
367.8
1827
Male, age 72, unknown
354.6
1870
Female, age 42, unknown
354.2
2019
Male, age 18, unknown
306.7
2666
Male, age 74, left hemisphere
293.1
1833
Male, age 53, unknown
292.9
2828
Female, age 72, unknown
291.2
1830
Male, age 51, unknown
282.2
2586
Male, age 75, left hemisphere
257.9
2219
Male, age 76, both hemispheres
250.4
Dorsal raphe nucleus nTPM: 318.0
2298
Female, age 72, unknown
371.5
2750
Male, age 76, both hemispheres
327.0
2047
Male, age 72, unknown
305.3
1828
Male, age 53, unknown
302.4
2016
Female, age 72, unknown
283.9
Inferior colliculus nTPM: 306.0
2097
Female, age 72, unknown
364.7
1848
Female, age 42, unknown
307.1
1890
Male, age 53, unknown
282.1
2849
Male, age 72, unknown
269.9
Median raphe nucleus nTPM: 333.5
2220
Male, age 76, midline
333.5
Periaquaductal grey, anterior nTPM: 340.8
1947
Male, age 18, unknown
373.8
2502
Female, age 75, unknown
351.0
1795
Male, age 51, unknown
297.7
Periaquaductal grey, dorsal nTPM: 284.2
1840
Male, age 53, unknown
296.5
2464
Female, age 72, unknown
289.4
1831
Male, age 72, unknown
288.9
2850
Male, age 76, both hemispheres
262.2
Periaquaductal grey, lateral nTPM: 265.7
2053
Male, age 18, unknown
299.9
2272
Male, age 74, both hemispheres
261.8
2140
Male, age 76, both hemispheres
235.3
Pretectal area nTPM: 336.3
1816
Male, age 51, unknown
403.3
2007
Male, age 72, unknown
384.8
1815
Male, age 53, unknown
364.9
1944
Female, age 72, unknown
362.7
1817
Female, age 42, unknown
360.7
2224
Female, age 72, unknown
332.0
2667
Female, age 75, unknown
325.7
2273
Male, age 74, both hemispheres
316.2
2825
Male, age 18, unknown
298.7
2407
Male, age 75, both hemispheres
289.5
2316
Male, age 76, right hemisphere
261.3
Red nucleus nTPM: 309.7
1821
Female, age 72, unknown
407.6
2503
Female, age 72, unknown
338.2
1954
Female, age 42, unknown
321.6
1865
Male, age 51, unknown
317.2
1904
Male, age 53, unknown
312.1
2725
Female, age 75, unknown
298.7
2785
Male, age 18, unknown
292.7
2227
Male, age 72, unknown
291.0
2769
Male, age 72, unknown
290.1
2588
Male, age 74, left hemisphere
283.1
2584
Male, age 75, left hemisphere
282.8
2823
Male, age 76, right hemisphere
280.9
Substantia nigra nTPM: 363.9
2241
Male, age 72, unknown
419.2
1941
Male, age 53, unknown
412.2
1889
Female, age 72, unknown
390.9
1916
Female, age 42, unknown
387.1
1851
Male, age 51, unknown
383.7
2409
Female, age 72, unknown
379.5
2665
Male, age 74, both hemispheres
341.1
2590
Female, age 75, unknown
323.2
2583
Male, age 75, right hemisphere
308.0
2699
Male, age 18, unknown
294.3
Superior colliculus nTPM: 313.8
2668
Female, age 75, unknown
356.4
2261
Male, age 18, unknown
355.8
2587
Male, age 74, left hemisphere
346.3
2087
Female, age 72, unknown
344.4
1796
Male, age 53, unknown
312.0
1913
Female, age 42, unknown
305.5
1839
Male, age 51, unknown
293.9
1895
Male, age 76, right hemisphere
288.7
2664
Male, age 75, both hemispheres
278.5
1995
Male, age 72, unknown
256.8
Ventral tegmental area nTPM: 340.8
2410
Female, age 72, unknown
382.7
2223
Female, age 72, unknown
360.8
1915
Female, age 42, unknown
343.6
1942
Male, age 51, unknown
333.8
2218
Male, age 76, both hemispheres
323.6
2021
Male, age 53, unknown
300.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
317.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 317.8
Samples: 183
Max nTPM: 746.0
Min nTPM: 137.3
Std nTPM: 87.7
Median nTPM: 299.3
GTEX-1N5O9-0011-R2a-SM-G8LM1
60-69 years, male
746.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
633.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
633.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
589.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
555.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
483.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
482.9
GTEX-1LSVX-0011-R2a-SM-G8OL9
60-69 years, male
475.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
465.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
461.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
448.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
442.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
436.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
436.2
GTEX-ZAK1-0011-R2a-SM-GPRX1
50-59 years, female
436.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
429.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
424.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
423.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
417.3
GTEX-1R9K4-0011-R2b-SM-G8LLF
60-69 years, male
417.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
406.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
406.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
405.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
404.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
402.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
401.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
401.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
400.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
399.2
GTEX-1KD5A-0011-R2b-SM-G9EPP
50-59 years, male
398.1
GTEX-1117F-0011-R2b-SM-GI4VL
60-69 years, female
394.4
GTEX-1I19N-0011-R2b-SM-GPRYG
70-79 years, male
394.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
392.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
388.5
GTEX-1JMQJ-0011-R2a-SM-F6493
50-59 years, male
388.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
384.1
GTEX-1KWVE-0011-R2a-SM-G8OLX
30-39 years, male
381.6
GTEX-117XS-0011-R2b-SM-GI4VT
60-69 years, male
379.7
GTEX-1LG7Y-0011-R2b-SM-G8LMM
50-59 years, male
379.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
376.2
GTEX-1NV8Z-0011-R2b-SM-F648N
60-69 years, male
374.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
373.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
372.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
371.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
371.6
GTEX-15SHU-0011-R2a-SM-GPRXS
40-49 years, female
369.4
GTEX-1JJ6O-0011-R2a-SM-EY5ZO
60-69 years, male
368.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
364.4
GTEX-1RDX4-0011-R2b-SM-F649Z
50-59 years, female
362.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
362.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
361.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
361.2
GTEX-1MCQQ-0011-R2a-SM-F649V
60-69 years, male
359.2
GTEX-1PWST-0011-R2b-SM-F3K5I
70-79 years, male
358.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
350.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
348.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
346.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
345.6
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
344.3
GTEX-13OW7-0011-R2b-SM-H6Q8E
50-59 years, male
343.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
341.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
341.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
340.7
GTEX-ZAJG-0011-R2a-SM-GNTAX
50-59 years, female
339.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
331.9
GTEX-1POEN-0011-R2b-SM-G8LLP
30-39 years, female
331.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
329.7
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
325.6
GTEX-11NUK-0011-R2a-SM-GINAO
50-59 years, male
325.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
324.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
322.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
319.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
318.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
316.8
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
316.0
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
316.0
GTEX-16GPK-0011-R2a-SM-GRR1F
60-69 years, male
315.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
314.5
GTEX-1QMI2-0011-R2b-SM-F648R
60-69 years, male
313.8
GTEX-1RQEC-0011-R2b-SM-EY5ZT
60-69 years, male
310.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
309.3
GTEX-1O9I2-0011-R2b-SM-F3K53
50-59 years, male
309.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
308.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
307.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
307.1
GTEX-1LKK1-0011-R2b-SM-G8OLT
50-59 years, female
307.0
GTEX-1PIIG-0011-R2b-SM-F648W
30-39 years, male
303.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
302.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
302.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
301.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
300.1
GTEX-11TTK-0011-R2b-SM-GJ3PU
60-69 years, female
299.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
298.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
297.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
296.9
GTEX-1192X-0011-R2b-SM-GI4VV
50-59 years, male
296.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
295.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
295.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
295.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
294.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
294.0
GTEX-1PPGY-0011-R2b-SM-F33YW
60-69 years, male
293.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
291.8
GTEX-13OVL-0011-R2b-SM-H65ZN
50-59 years, male
288.1
GTEX-1R9PO-0011-R2a-SM-F2TBH
60-69 years, female
288.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
287.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
286.8
GTEX-1JMPZ-0011-R2a-SM-G8LLS
30-39 years, male
286.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
285.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
284.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
284.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
283.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
283.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
283.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
282.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
280.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
280.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
279.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
279.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
279.4
GTEX-ZYY3-0011-R2a-SM-GNTB2
60-69 years, female
277.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
277.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
276.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
276.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
274.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
273.3
GTEX-1MJK2-0011-R2b-SM-EXUS5
50-59 years, male
273.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
272.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
270.0
GTEX-1N2EF-0011-R2b-SM-F6482
60-69 years, male
266.2
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
265.9
GTEX-1NV5F-0011-R2a-SM-G8LME
60-69 years, female
265.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
261.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
260.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
259.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
259.5
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
259.5
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
258.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
258.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
257.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
257.5
GTEX-1JN1M-0011-R2b-SM-G9EPE
60-69 years, female
255.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
255.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
252.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
250.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
250.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
249.1
GTEX-111FC-0011-R2a-SM-GIN8S
60-69 years, male
248.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
248.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
247.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
244.3
GTEX-1KD4Q-0011-R2a-SM-F649I
40-49 years, male
243.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
242.7
GTEX-1RQED-0011-R2a-SM-F3K5T
60-69 years, male
241.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
239.8
GTEX-1P4AB-0011-R2a-SM-F649K
50-59 years, male
237.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
237.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
233.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
232.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
230.6
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
229.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
228.3
GTEX-RN5K-0011-R2A-SM-GQ1CA
50-59 years, female
227.9
GTEX-1N2EE-0011-R2a-SM-F649F
60-69 years, male
225.8
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
225.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
223.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
222.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
222.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
216.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
215.5
GTEX-1CB4J-0011-R2a-SM-9WG5N
60-69 years, male
214.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
212.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
211.6
GTEX-15G19-0011-R2b-SM-H6Q7S
60-69 years, male
211.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
210.3
GTEX-1IDJH-0011-R2a-SM-GPI9D
70-79 years, male
209.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
202.0
GTEX-ZZPT-0011-R2a-SM-GNTB1
50-59 years, male
194.1
GTEX-1HBPH-0011-R2a-SM-GQ1DS
40-49 years, female
189.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
184.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
169.3
GTEX-12696-0011-R2b-SM-GHWPY
60-69 years, male
167.3
GTEX-X4EP-0011-R2B-SM-3P625
60-69 years, female
137.3
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
356.0
Pig sample
Sample description
nTPM
Substantia nigra nTPM: 340.4
Samples: 4
Max nTPM: 449.4
Min nTPM: 252.1
Sample A
Female
449.4
Sample B
Female
317.5
Sample C
Male
342.4
Sample D
Male
252.1
Midbrain nTPM: 356.0
Samples: 4
Max nTPM: 414.8
Min nTPM: 284.0
Sample A
Female
414.8
Sample B
Female
363.7
Sample C
Male
361.3
Sample D
Male
284.0
Periaqueductal gray nTPM: 264.6
Samples: 3
Max nTPM: 278.8
Min nTPM: 239.0
Sample B
Female
278.8
Sample C
Male
275.9
Sample D
Male
239.0
Superior colliculi nTPM: 338.5
Samples: 4
Max nTPM: 392.4
Min nTPM: 296.9
Sample A
Female
362.4
Sample B
Female
302.1
Sample C
Male
392.4
Sample D
Male
296.9
MIDBRAIN - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
739.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 739.0
Samples: 4
Max nTPM: 775.6
Min nTPM: 695.5
Sample A
Male
695.5
Sample B
Male
752.6
Sample C
Female
775.6
Sample D
Female
732.2
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.