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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
185.1
nTPM
HPA Brain:
109.4
nTPM
GTEx:
185.1
nTPM
FANTOM5:
143.6
Scaled Tags Per Million
Pig:
93.3
nTPM
Mouse:
61.5
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
109.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 99.9
2411
Female, age 72, unknown
122.3
1827
Male, age 72, unknown
113.6
2019
Male, age 18, unknown
108.6
2828
Female, age 72, unknown
106.4
2666
Male, age 74, left hemisphere
104.6
1870
Female, age 42, unknown
97.8
1833
Male, age 53, unknown
90.3
2219
Male, age 76, both hemispheres
89.2
1830
Male, age 51, unknown
86.9
2586
Male, age 75, left hemisphere
79.8
Dorsal raphe nucleus nTPM: 96.8
2298
Female, age 72, unknown
121.5
2750
Male, age 76, both hemispheres
97.9
1828
Male, age 53, unknown
96.4
2047
Male, age 72, unknown
87.4
2016
Female, age 72, unknown
80.7
Inferior colliculus nTPM: 86.1
2097
Female, age 72, unknown
107.2
1848
Female, age 42, unknown
82.5
2849
Male, age 72, unknown
79.9
1890
Male, age 53, unknown
74.6
Median raphe nucleus nTPM: 109.4
2220
Male, age 76, midline
109.4
Periaquaductal grey, anterior nTPM: 97.9
1795
Male, age 51, unknown
103.4
1947
Male, age 18, unknown
101.4
2502
Female, age 75, unknown
88.8
Periaquaductal grey, dorsal nTPM: 81.3
1831
Male, age 72, unknown
90.3
2850
Male, age 76, both hemispheres
81.5
2464
Female, age 72, unknown
77.5
1840
Male, age 53, unknown
76.1
Periaquaductal grey, lateral nTPM: 94.7
2272
Male, age 74, both hemispheres
115.1
2053
Male, age 18, unknown
88.9
2140
Male, age 76, both hemispheres
80.0
Pretectal area nTPM: 104.0
1817
Female, age 42, unknown
127.6
1815
Male, age 53, unknown
118.0
1816
Male, age 51, unknown
117.8
2007
Male, age 72, unknown
114.5
1944
Female, age 72, unknown
113.1
2224
Female, age 72, unknown
104.9
2273
Male, age 74, both hemispheres
104.7
2667
Female, age 75, unknown
101.2
2407
Male, age 75, both hemispheres
86.3
2825
Male, age 18, unknown
83.3
2316
Male, age 76, right hemisphere
72.6
Red nucleus nTPM: 99.7
1821
Female, age 72, unknown
118.8
2785
Male, age 18, unknown
107.5
1954
Female, age 42, unknown
107.4
1904
Male, age 53, unknown
105.6
1865
Male, age 51, unknown
103.7
2503
Female, age 72, unknown
103.2
2227
Male, age 72, unknown
99.9
2769
Male, age 72, unknown
99.2
2725
Female, age 75, unknown
98.4
2584
Male, age 75, left hemisphere
89.2
2823
Male, age 76, right hemisphere
84.1
2588
Male, age 74, left hemisphere
79.3
Substantia nigra nTPM: 95.7
1916
Female, age 42, unknown
114.2
1889
Female, age 72, unknown
110.7
1941
Male, age 53, unknown
104.5
1851
Male, age 51, unknown
104.1
2583
Male, age 75, right hemisphere
92.9
2409
Female, age 72, unknown
92.3
2699
Male, age 18, unknown
87.6
2590
Female, age 75, unknown
87.0
2241
Male, age 72, unknown
84.1
2665
Male, age 74, both hemispheres
80.0
Superior colliculus nTPM: 96.7
2668
Female, age 75, unknown
117.2
2261
Male, age 18, unknown
108.8
2087
Female, age 72, unknown
108.3
2587
Male, age 74, left hemisphere
105.9
1796
Male, age 53, unknown
104.6
1913
Female, age 42, unknown
96.1
1839
Male, age 51, unknown
88.5
1995
Male, age 72, unknown
88.0
1895
Male, age 76, right hemisphere
87.1
2664
Male, age 75, both hemispheres
62.8
Ventral tegmental area nTPM: 101.2
2410
Female, age 72, unknown
118.3
2218
Male, age 76, both hemispheres
107.3
1915
Female, age 42, unknown
102.1
2223
Female, age 72, unknown
99.5
2021
Male, age 53, unknown
90.9
1942
Male, age 51, unknown
89.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
185.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 185.1
Samples: 139
Max nTPM: 353.2
Min nTPM: 106.3
Std nTPM: 41.4
Median nTPM: 179.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
353.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
321.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
304.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
297.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
279.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
277.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
264.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
259.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
251.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
250.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
248.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
243.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
242.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
237.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
233.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
226.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
226.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
225.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
223.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
223.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
222.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
220.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
220.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
218.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
218.0
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
214.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
214.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
211.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
211.5
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
211.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
211.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
210.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
209.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
209.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
208.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
208.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
206.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
206.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
203.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
202.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
199.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
198.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
197.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
195.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
195.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
195.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
193.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
192.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
192.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
191.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
191.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
190.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
190.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
190.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
188.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
186.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
185.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
185.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
185.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
183.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
183.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
183.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
183.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
183.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
182.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
182.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
182.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
180.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
180.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
179.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
179.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
178.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
178.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
178.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
178.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
176.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
176.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
176.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
176.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
176.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
175.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
174.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
173.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
172.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
172.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
171.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
171.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
169.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
169.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
169.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
167.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
166.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
165.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
164.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
163.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
163.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
162.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
162.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
158.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
157.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
156.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
156.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
156.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
156.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
156.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
154.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
154.3
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
154.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
153.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
152.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
152.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
150.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
147.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
147.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
147.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
146.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
146.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
146.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
145.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
144.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
144.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
144.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
143.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
142.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
142.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
141.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
140.4
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
139.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
135.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
135.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
130.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
129.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
125.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
124.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
124.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
120.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
116.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
110.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
106.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.