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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
130.8
nTPM
FANTOM5:
134.1
Scaled Tags Per Million
Pig:
88.5
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
130.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 104.3
2188
Female, age 91, both hemispheres
110.6
2301
Female, age 85, both hemispheres
108.6
2090
Male, age 80, both hemispheres
104.9
1984
Male, age 76, both hemispheres
93.1
Dorsal cochlear nucleus nTPM: 92.8
2187
Female, age 91, both hemispheres
101.7
2058
Male, age 76, both hemispheres
99.2
2802
Male, age 74, right hemisphere
91.0
2370
Male, age 61, both hemispheres
87.1
2378
Male, age 80, both hemispheres
85.0
Dorsal tegmental nucleus nTPM: 92.7
2083
Male, age 80, both hemispheres
105.8
2358
Male, age 61, both hemispheres
94.3
2326
Male, age 74, both hemispheres
92.6
1936
Male, age 76, left hemisphere
78.3
Dorsolateral tegmental area nTPM: 101.4
2751
Female, age 85, both hemispheres
107.4
2654
Male, age 80, both hemispheres
104.0
2360
Male, age 74, both hemispheres
101.9
2337
Male, age 61, both hemispheres
97.6
2141
Male, age 76, both hemispheres
96.2
Kolliker-Fuse nucleus nTPM: 98.9
2793
Female, age 91, left hemisphere
101.5
2163
Male, age 80, both hemispheres
98.9
2315
Male, age 76, right hemisphere
96.2
Lateral lemniscal nuclei nTPM: 107.8
2169
Male, age 76, both hemispheres
126.7
2746
Female, age 85, left hemisphere
118.5
2036
Male, age 80, both hemispheres
107.1
2453
Male, age 74, right hemisphere
96.7
2320
Female, age 91, left hemisphere
90.0
Lateral parabrachial nucleus nTPM: 106.6
2139
Female, age 85, right hemisphere
122.2
2013
Male, age 80, both hemispheres
116.0
2790
Male, age 61, both hemispheres
96.8
2792
Male, age 76, both hemispheres
91.5
Lateral vestibular nucleus nTPM: 97.0
2311
Male, age 80, both hemispheres
98.7
2184
Male, age 76, both hemispheres
95.4
Locus coeruleus nTPM: 116.3
2123
Female, age 91, both hemispheres
146.5
1980
Male, age 76, both hemispheres
139.5
2014
Male, age 55, unknown
120.3
2720
Male, age 74, both hemispheres
116.6
2162
Male, age 80, both hemispheres
110.2
2317
Female, age 72, unknown
96.2
2788
Male, age 74, unknown
85.1
Medial parabrachial nucleus nTPM: 106.6
2170
Female, age 91, both hemispheres
139.4
2854
Male, age 80, both hemispheres
108.4
2463
Female, age 85, right hemisphere
106.0
2156
Male, age 61, both hemispheres
92.2
2786
Male, age 76, both hemispheres
86.8
Medial periolivary nuclei nTPM: 111.8
2063
Male, age 76, both hemispheres
131.6
2171
Female, age 85, both hemispheres
128.4
2791
Male, age 74, right hemisphere
116.6
2081
Male, age 80, both hemispheres
96.8
2458
Female, age 91, both hemispheres
85.5
Motor facial nucleus nTPM: 107.2
2062
Male, age 76, both hemispheres
131.8
2365
Male, age 74, right hemisphere
125.3
2126
Male, age 61, both hemispheres
111.0
2697
Female, age 85, both hemispheres
103.3
2327
Male, age 80, both hemispheres
87.1
2795
Female, age 91, both hemispheres
84.5
Motor trigeminal nucleus nTPM: 96.6
2079
Male, age 80, both hemispheres
110.0
2560
Male, age 74, both hemispheres
99.5
2335
Male, age 61, both hemispheres
93.0
2309
Male, age 76, both hemispheres
91.4
2321
Female, age 91, both hemispheres
89.1
Nuclei of the trapezoid body nTPM: 117.5
2159
Male, age 61, both hemispheres
153.3
1983
Male, age 76, both hemispheres
146.3
2735
Female, age 85, both hemispheres
109.5
2166
Male, age 80, both hemispheres
98.2
2368
Female, age 91, both hemispheres
80.4
Nucleus raphe magnus nTPM: 123.2
2160
Male, age 61, both hemispheres
184.7
2172
Female, age 85, both hemispheres
129.8
2455
Male, age 74, both hemispheres
126.9
2051
Male, age 76, both hemispheres
108.6
2328
Male, age 80, both hemispheres
95.7
2459
Female, age 91, both hemispheres
93.6
Paramedian reticular nucleus nTPM: 105.2
2050
Female, age 85, both hemispheres
120.1
2057
Male, age 80, both hemispheres
112.7
2313
Male, age 61, both hemispheres
97.1
2052
Male, age 76, both hemispheres
91.1
Pedunculopontine tegmental nucleus nTPM: 101.7
2334
Male, age 80, both hemispheres
108.6
2338
Male, age 61, both hemispheres
103.6
1921
Female, age 85, both hemispheres
92.9
Pontine nuclei nTPM: 130.8
2727
Male, age 61, right hemisphere
183.6
1863
Male, age 55, unknown
146.1
2787
Female, age 85, both hemispheres
136.9
2109
Female, age 72, unknown
127.9
2454
Male, age 74, left hemisphere
126.3
1968
Male, age 76, left hemisphere
124.7
2115
Male, age 80, left hemisphere
104.6
2319
Female, age 91, both hemispheres
96.5
Pontine raphe nucleus nTPM: 107.6
2122
Female, age 85, midline
121.6
2853
Male, age 76, midline
93.7
Posteroventral cochlear nucleus nTPM: 104.2
2752
Female, age 85, both hemispheres
112.2
2135
Female, age 91, both hemispheres
110.5
2070
Male, age 76, both hemispheres
104.0
2371
Male, age 61, both hemispheres
104.0
2341
Male, age 80, both hemispheres
90.3
Principal sensory trigeminal nucleus nTPM: 114.0
2158
Male, age 61, both hemispheres
163.3
2008
Male, age 80, left hemisphere
108.5
2324
Male, age 76, both hemispheres
93.1
2367
Female, age 91, left hemisphere
91.2
Reticular pontine nucleus, caudal nTPM: 102.4
2092
Male, age 76, both hemispheres
120.9
2559
Male, age 74, both hemispheres
109.9
2332
Male, age 80, right hemisphere
90.5
2457
Female, age 91, both hemispheres
88.5
Reticular pontine nucleus, oral nTPM: 102.9
1939
Male, age 80, both hemispheres
111.6
2012
Female, age 85, both hemispheres
109.8
2361
Male, age 74, both hemispheres
100.1
2167
Male, age 76, both hemispheres
98.7
2366
Female, age 91, both hemispheres
94.1
Reticulotegmental nucleus nTPM: 97.8
2322
Female, age 91, both hemispheres
99.6
2333
Male, age 80, both hemispheres
98.0
2452
Male, age 74, both hemispheres
97.8
2325
Male, age 76, both hemispheres
95.8
Spinal trigeminal nucleus, oral nTPM: 90.8
2737
Female, age 85, both hemispheres
97.0
2164
Male, age 80, both hemispheres
90.7
1978
Male, age 76, both hemispheres
84.7
Subcoeruleus area nTPM: 100.5
2369
Female, age 85, left hemisphere
106.1
1958
Male, age 80, both hemispheres
102.8
2089
Male, age 76, left hemisphere
102.4
2323
Female, age 91, left hemisphere
101.3
2451
Male, age 74, both hemispheres
89.6
Superior olive nTPM: 112.9
2364
Male, age 74, right hemisphere
146.1
2020
Male, age 76, both hemispheres
118.3
1875
Female, age 85, both hemispheres
109.4
2329
Male, age 80, right hemisphere
95.9
2561
Female, age 91, both hemispheres
94.8
Ventral periolivary nuclei nTPM: 110.1
2130
Female, age 85, both hemispheres
137.4
2165
Male, age 80, both hemispheres
114.7
2023
Male, age 76, both hemispheres
110.3
2794
Female, age 91, left hemisphere
77.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 101.5
2449
Male, age 74, both hemispheres
113.7
2840
Female, age 85, both hemispheres
110.9
2359
Male, age 61, both hemispheres
103.9
1959
Male, age 76, both hemispheres
101.1
2456
Female, age 91, both hemispheres
90.6
2161
Male, age 80, both hemispheres
88.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.