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  • TISSUE

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  • RPS15
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1050.3 nTPM
HPA Brain:561.4 nTPM
GTEx:1050.3 nTPM
Mouse:1627.7 nTPM
Allen mouse:10.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

561.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 459.7
1961 Female, age 42, unknown 488.7
2226 Male, age 75, left hemisphere 430.7
Dorsomedial nucleus
nTPM: 467.4
1989 Male, age 62, unknown 481.7
2017 Female, age 42, unknown 477.3
2041 Female, age 72, unknown 443.3
Lateral hypothalamic area
nTPM: 516.6
1791 Male, age 80, right hemisphere 555.0
2228 Male, age 66, unknown 553.7
2271 Male, age 75, both hemispheres 485.1
2412 Male, age 62, unknown 472.5
Mammillary body
nTPM: 468.0
1945 Male, age 80, right hemisphere 502.3
1948 Female, age 72, unknown 495.0
1834 Female, age 42, unknown 493.3
1923 Female, age 72, unknown 437.0
2413 Male, age 66, unknown 412.2
Paraventricular nucleus
nTPM: 538.9
2700 Male, age 62, unknown 538.9
Preoptic area
nTPM: 441.5
1861 Female, age 42, unknown 469.3
2414 Female, age 72, unknown 464.6
1907 Male, age 80, right hemisphere 390.5
Supraoptic nucleus
nTPM: 561.4
2043 Male, age 62, unknown 594.8
1894 Female, age 72, unknown 550.2
2835 Female, age 72, unknown 539.3
Ventromedial nucleus
nTPM: 484.8
1982 Female, age 72, unknown 564.8
1822 Female, age 42, unknown 404.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1050.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1050.3
Samples: 257

Max nTPM: 3844.8
Min nTPM: 281.4
Std nTPM: 434.4
Median nTPM: 939.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 3844.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2991.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2806.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2653.9
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 2372.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2348.3
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 2269.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2266.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 2161.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 2088.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1922.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1731.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1705.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1685.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1674.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1656.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1646.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1640.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1635.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1633.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1587.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1583.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1572.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1565.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1560.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1553.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1540.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1539.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1536.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1483.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1482.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1476.0
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1470.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1459.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1434.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1427.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1422.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1420.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1416.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 1378.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1359.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1357.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1357.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1350.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1347.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1346.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1337.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1330.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1299.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1299.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1292.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1290.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1285.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1283.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1283.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1260.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1258.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1257.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1250.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 1246.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1242.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1236.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1211.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1202.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1196.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1183.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1180.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1170.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1169.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1157.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1155.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1152.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 1146.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1144.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1139.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1124.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1119.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1117.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1115.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1113.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 1111.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 1107.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1098.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1096.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1096.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1094.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1094.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 1090.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1089.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1088.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1085.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1085.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1079.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1078.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1073.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1043.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1041.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 1035.0
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 1030.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1029.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1029.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1025.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1023.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 1022.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 1020.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1015.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1009.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1000.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 998.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 997.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 995.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 994.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 986.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 984.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 982.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 980.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 979.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 979.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 975.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 962.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 962.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 960.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 960.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 956.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 954.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 952.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 946.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 945.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 939.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 935.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 934.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 929.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 925.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 923.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 919.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 918.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 917.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 913.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 913.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 910.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 908.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 907.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 905.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 902.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 900.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 900.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 900.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 897.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 892.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 891.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 891.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 889.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 887.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 886.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 886.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 879.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 873.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 872.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 871.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 869.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 867.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 864.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 861.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 855.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 845.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 837.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 835.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 832.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 832.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 828.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 827.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 827.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 825.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 823.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 822.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 819.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 819.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 818.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 815.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 813.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 811.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 807.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 807.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 807.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 806.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 804.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 800.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 799.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 794.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 794.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 790.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 788.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 775.3
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 773.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 772.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 772.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 771.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 771.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 770.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 769.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 766.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 766.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 765.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 763.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 759.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 756.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 752.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 750.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 742.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 740.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 736.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 736.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 734.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 730.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 727.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 727.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 723.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 716.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 715.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 708.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 706.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 705.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 705.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 700.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 694.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 691.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 689.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 689.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 686.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 679.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 675.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 673.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 673.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 667.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 666.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 665.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 658.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 654.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 652.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 646.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 639.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 634.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 626.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 625.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 622.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 618.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 583.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 560.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 558.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 541.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 539.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 536.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 519.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 504.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 320.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 288.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 281.4
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1627.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1627.7
Samples: 4

Max nTPM: 1925.7
Min nTPM: 1502.1
Sample A Male 1574.2
Sample B Male 1925.7
Sample C Female 1508.9
Sample D Female 1502.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.3
68321982 Antisense, RP_041207_01_B08, Mouse strain C57BL/6J (56 days, male) 10.9
75774687 Antisense, RP_060530_01_D12, Mouse strain C57BL/6J (56 days, male) 9.7

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