HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:1317.9 nTPM
HPA Brain:179.9 nTPM
GTEx:1317.9 nTPM
FANTOM5:762.4 Scaled Tags Per Million
Pig:261.1 nTPM
Mouse:894.8 nTPM
Allen mouse:13.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031801
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 179.9
Sample id Sample description nTPM
Hippocampus
nTPM: 177.9
1898 Male, age 80, left hemisphere 216.0
2529 Female, age 94, left hemisphere 197.2
2621 Female, age 67, right hemisphere 170.0
1911 Female, age 85, right hemisphere 167.6
1855 Male, age 76, left hemisphere 160.3
2148 Female, age 91, left hemisphere 156.4
Dentate gyrus
nTPM: 168.1
2530 Female, age 94, left hemisphere 220.7
2010 Male, age 76, both hemispheres 197.2
1927 Female, age 91, both hemispheres 154.8
2246 Female, age 85, both hemispheres 154.5
2531 Female, age 67, both hemispheres 145.8
2528 Male, age 74, both hemispheres 135.9
Entorhinal gyrus
nTPM: 170.4
2686 Male, age 75, right hemisphere 214.1
2117 Female, age 91, right hemisphere 204.1
1787 Male, age 76, left hemisphere 168.6
1938 Female, age 85, left hemisphere 161.9
2764 Male, age 80, right hemisphere 151.3
2613 Female, age 94, left hemisphere 122.2
Hippocampus, CA1
nTPM: 163.1
2082 Female, age 91, right hemisphere 188.6
1873 Female, age 85, both hemispheres 175.3
2045 Male, age 76, both hemispheres 165.2
2527 Male, age 74, both hemispheres 143.5
2749 Male, age 80, left hemisphere 142.8
Hippocampus, CA2
nTPM: 173.9
1892 Male, age 76, both hemispheres 194.4
1963 Male, age 80, left hemisphere 192.1
1940 Female, age 85, left hemisphere 174.2
2437 Female, age 94, left hemisphere 165.3
2113 Female, age 91, right hemisphere 164.8
2249 Male, age 74, both hemispheres 152.9
Hippocampus, CA3
nTPM: 148.8
1891 Female, age 85, both hemispheres 190.4
1867 Male, age 76, both hemispheres 187.3
2137 Male, age 80, left hemisphere 153.1
2861 Female, age 67, both hemispheres 131.2
2436 Male, age 74, both hemispheres 124.0
2620 Female, age 94, left hemisphere 106.9
Parahippocampal cortex
nTPM: 161.7
2018 Male, age 76, both hemispheres 219.4
1933 Female, age 85, both hemispheres 172.7
1850 Male, age 80, both hemispheres 169.8
2250 Female, age 67, right hemisphere 169.0
2245 Female, age 91, both hemispheres 168.2
1990 Female, age 91, right hemisphere 157.9
2532 Female, age 72, left hemisphere 149.8
2692 Male, age 74, both hemispheres 147.5
2693 Female, age 94, both hemispheres 132.8
2622 Female, age 67, right hemisphere 129.7
Perirhinal gyrus
nTPM: 163.1
1841 Female, age 85, right hemisphere 184.2
1794 Male, age 80, right hemisphere 167.6
1847 Female, age 91, left hemisphere 167.6
2848 Male, age 76, right hemisphere 154.9
2521 Female, age 94, right hemisphere 141.2
Subiculum
nTPM: 179.9
2042 Male, age 76, both hemispheres 200.3
1977 Female, age 85, both hemispheres 196.6
2438 Female, age 94, left hemisphere 196.4
1901 Male, age 80, both hemispheres 183.4
2729 Female, age 91, right hemisphere 156.2
2619 Male, age 74, both hemispheres 146.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1317.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1317.9
Samples: 255

Max nTPM: 4296.9
Min nTPM: 539.5
Std nTPM: 457.5
Median nTPM: 1221.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 4296.9
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 3240.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 2907.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2804.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2461.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2427.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2418.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2357.3
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2297.0
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 2294.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2181.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 762.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 762.4
FF:10169-103B7 60 years, female 909.7
FF:10153-102I9 76 years, female 615.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 261.1
Pig sample Sample description nTPM
Subiculum
nTPM: 205.7
Samples: 4

Max nTPM: 281.4
Min nTPM: 155.7
Sample A Female 281.4
Sample B Female 195.7
Sample C Male 155.7
Sample D Male 190.0
Dorsal hippocampus
nTPM: 261.1
Samples: 4

Max nTPM: 358.9
Min nTPM: 180.4
Sample A Female 358.9
Sample B Female 224.2
Sample C Male 280.9
Sample D Male 180.4
Entorhinal cortex
nTPM: 212.7
Samples: 4

Max nTPM: 258.8
Min nTPM: 150.4
Sample A Female 196.9
Sample B Female 258.8
Sample C Male 244.8
Sample D Male 150.4
Ventral hippocampus
nTPM: 210.8
Samples: 4

Max nTPM: 230.1
Min nTPM: 184.2
Sample A Female 230.1
Sample B Female 184.2
Sample C Male 211.9
Sample D Male 217.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 894.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 848.6
Samples: 4

Max nTPM: 906.6
Min nTPM: 788.7
Sample A Male 873.3
Sample B Male 825.9
Sample C Female 906.6
Sample D Female 788.7
Hippocampal formation
nTPM: 894.9
Samples: 4

Max nTPM: 1102.9
Min nTPM: 791.3
Sample A Male 1102.9
Sample B Male 791.3
Sample C Female 864.1
Sample D Female 821.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 13.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.8
68637521 Antisense, RP_050126_01_A11, Mouse strain C57BL/6J (56 days, male) 13.8

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