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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
4972.2
Sample id
Sample description
nTPM
Amygdala nTPM: 4972.2
1987
Female, age 91, left hemisphere
6226.2
2514
Male, age 75, right hemisphere
4931.7
2814
Male, age 76, right hemisphere
4665.1
2517
Female, age 94, left hemisphere
4662.0
2695
Female, age 67, right hemisphere
4376.1
Basal amygdala nTPM: 3518.4
2243
Female, age 91, right hemisphere
4614.3
2110
Male, age 80, left hemisphere
4162.0
1955
Male, age 76, both hemispheres
4133.3
2609
Male, age 75, right hemisphere
3802.9
2685
Female, age 94, left hemisphere
3185.5
2827
Female, age 67, right hemisphere
1212.3
Central amygdala nTPM: 4464.1
2515
Male, age 75, right hemisphere
5920.4
1905
Male, age 76, both hemispheres
4777.8
2826
Female, age 94, left hemisphere
4168.4
2239
Male, age 80, left hemisphere
3943.3
2701
Female, age 91, right hemisphere
3510.9
Corticomedial amygdala nTPM: 3824.4
2242
Female, age 91, right hemisphere
5801.7
2829
Male, age 80, left hemisphere
4214.4
2240
Male, age 76, both hemispheres
3885.3
2428
Male, age 75, right hemisphere
3698.9
2429
Female, age 94, left hemisphere
3339.9
2535
Female, age 67, right hemisphere
2006.1
Lateral amygdala nTPM: 3108.8
1883
Male, age 76, both hemispheres
3964.3
2534
Female, age 94, left hemisphere
3631.0
2256
Male, age 80, left hemisphere
3463.2
2516
Male, age 75, right hemisphere
3329.1
2255
Female, age 91, right hemisphere
3294.9
2830
Female, age 67, right hemisphere
970.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
6088.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 6088.1
Samples: 181
Max nTPM: 20942.1
Min nTPM: 561.9
Std nTPM: 2982.4
Median nTPM: 5811.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
20942.1
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
14499.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
14391.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13669.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
13629.3
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
13256.9
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
12706.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
12245.3
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
11892.7
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
11349.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
11214.5
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
11076.8
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
10717.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
10550.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
10526.5
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
10151.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
10088.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
9974.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
9839.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
9761.4
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
9670.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
9510.3
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
9470.2
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
9468.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
9298.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
8968.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
8934.6
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
8677.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
8670.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
8560.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
8531.2
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
8357.9
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
8340.1
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
8217.5
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
8040.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
8001.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
7874.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
7872.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
7846.7
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
7832.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
7830.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
7656.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7644.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
7522.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
7486.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
7300.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
7259.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
7217.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
7176.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
7035.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
6990.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
6969.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
6944.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
6943.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
6929.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
6874.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
6852.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
6822.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
6797.6
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
6790.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
6768.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
6710.3
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
6668.3
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
6667.1
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
6639.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
6621.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
6603.4
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
6592.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
6498.0
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
6458.0
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
6413.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
6404.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
6381.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
6374.5
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
6352.5
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
6337.4
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
6312.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
6293.3
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
6230.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
6219.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
6144.0
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
6066.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
6035.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
5986.0
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
5983.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
5958.6
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
5929.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
5909.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
5847.5
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
5840.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
5811.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
5753.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
5718.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
5631.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
5601.2
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
5598.8
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
5558.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
5519.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
5509.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
5449.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
5402.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
5346.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
5300.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
5294.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
5277.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
5232.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
5188.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
5153.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
5139.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
5096.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
5085.7
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
5048.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
4955.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
4940.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
4938.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
4931.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
4917.1
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
4895.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
4894.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
4860.8
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
4857.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
4773.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
4751.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
4680.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
4672.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
4638.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
4507.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
4485.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
4438.8
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
4432.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
4421.4
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
4373.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
4290.4
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
4237.7
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
4184.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
4153.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
4144.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
4106.8
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
4089.0
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
3991.5
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
3909.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
3734.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
3708.8
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
3547.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
3541.4
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
3530.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
3518.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
3400.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
3385.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
3357.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
3325.9
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
3317.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
3201.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
3185.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
3158.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
2965.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
2947.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
2925.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2923.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
2873.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
2809.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
2752.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
2720.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
2632.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
2459.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
2353.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
2334.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
2317.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
2270.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
2258.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
2236.2
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
2187.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
2159.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1789.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1637.8
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
1509.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1473.9
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
1369.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
1339.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1119.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
561.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
3350.3
Pig sample
Sample description
nTPM
Amygdala nTPM: 3350.3
Samples: 4
Max nTPM: 3703.0
Min nTPM: 2991.0
Sample A
Female
3703.0
Sample B
Female
3231.4
Sample C
Male
3475.8
Sample D
Male
2991.0
AMYGDALA - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1117.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 1117.8
Samples: 4
Max nTPM: 1244.3
Min nTPM: 998.3
Sample A
Male
998.3
Sample B
Male
1048.9
Sample C
Female
1244.3
Sample D
Female
1179.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.