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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3096.3
nTPM
Monaco:
889.4
nTPM
Schmiedel:
163.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3096.3
HPA sample
nTPM
gdT-cell nTPM: 1410.9
Samples: 6
Max nTPM: 2060.2
Min nTPM: 968.8
P10809_1007
1906.8
P10809_1022
1104.8
P10809_1041
2060.2
P10809_1060
1272.8
P10809_1077
968.8
P10809_1098
1151.7
MAIT T-cell nTPM: 2073.2
Samples: 6
Max nTPM: 2874.0
Min nTPM: 1330.8
P10809_1006
2110.1
P10809_1024
1645.6
P10809_1043
2874.0
P10809_1062
2459.7
P10809_1083
1330.8
P10809_1097
2019.1
Memory CD4 T-cell nTPM: 2416.1
Samples: 6
Max nTPM: 3754.4
Min nTPM: 1266.2
P10809_1014
3107.6
P10809_1026
2133.8
P10809_1045
3754.4
P10809_1064
2162.4
P10809_1086
1266.2
P10809_1113
2072.1
Memory CD8 T-cell nTPM: 1996.1
Samples: 5
Max nTPM: 2849.4
Min nTPM: 1474.1
P10809_1012
2221.9
P10809_1027
1474.1
P10809_1046
2849.4
P10809_1065
1931.3
P10809_1111
1504.0
Naive CD4 T-cell nTPM: 3096.4
Samples: 6
Max nTPM: 4508.6
Min nTPM: 1613.0
P10809_1015
3799.0
P10809_1030
2515.7
P10809_1049
4508.6
P10809_1068
3753.3
P10809_1085
1613.0
P10809_1112
2388.5
Naive CD8 T-cell nTPM: 2470.7
Samples: 6
Max nTPM: 4352.0
Min nTPM: 909.9
P10809_1016
4352.0
P10809_1031
1834.2
P10809_1050
3128.1
P10809_1069
2536.1
P10809_1087
909.9
P10809_1110
2063.9
T-reg nTPM: 1774.8
Samples: 6
Max nTPM: 2402.3
Min nTPM: 1369.6
P10809_1018
1842.8
P10809_1037
1511.9
P10809_1056
2402.3
P10809_1075
2081.5
P10809_1094
1440.9
P10809_1106
1369.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
889.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 660.4
Samples: 4
Max nTPM: 944.8
Min nTPM: 211.8
RHH5202_R3573
211.8
RHH5230_R3602
896.0
RHH5259_R3631
944.8
RHH5288_R3660
588.9
Effector memory CD8 T-cell nTPM: 250.7
Samples: 4
Max nTPM: 444.5
Min nTPM: 158.7
RHH5203_R3574
158.7
RHH5231_R3603
236.0
RHH5260_R3632
444.5
RHH5289_R3661
163.7
MAIT T-cell nTPM: 491.6
Samples: 4
Max nTPM: 591.0
Min nTPM: 398.3
RHH5233_R3605
398.3
RHH5205_R3576
425.9
RHH5262_R3634
591.0
RHH5297_R3663
551.1
Memory CD4 T-cell TFH nTPM: 479.2
Samples: 4
Max nTPM: 591.3
Min nTPM: 262.6
RHH5300_R3666
557.4
RHH5236_R3608
591.3
RHH5265_R3637
505.4
RHH5208_R3579
262.6
Memory CD4 T-cell Th1 nTPM: 842.7
Samples: 4
Max nTPM: 1366.6
Min nTPM: 268.7
RHH5210_R3581
268.7
RHH5302_R3668
888.7
RHH5238_R3610
1366.6
RHH5267_R3639
846.6
Memory CD4 T-cell Th1/Th17 nTPM: 676.7
Samples: 4
Max nTPM: 922.3
Min nTPM: 304.5
RHH5303_R3669
602.5
RHH5211_R3582
304.5
RHH5239_R3611
877.3
RHH5268_R3640
922.3
Memory CD4 T-cell Th17 nTPM: 648.3
Samples: 4
Max nTPM: 969.0
Min nTPM: 345.6
RHH5304_R3670
969.0
RHH5212_R3583
345.6
RHH5240_R3612
640.7
RHH5269_R3641
638.0
Memory CD4 T-cell Th2 nTPM: 705.5
Samples: 4
Max nTPM: 1139.9
Min nTPM: 381.1
RHH5305_R3671
1139.9
RHH5213_R3584
381.1
RHH5241_R3613
678.8
RHH5270_R3642
622.2
Naive CD4 T-cell nTPM: 889.4
Samples: 4
Max nTPM: 1328.8
Min nTPM: 585.2
RHH5306_R3672
1328.8
RHH5214_R3585
585.2
RHH5242_R3614
683.1
RHH5271_R3643
960.6
Naive CD8 T-cell nTPM: 789.3
Samples: 4
Max nTPM: 1108.4
Min nTPM: 309.6
RHH5201_R3572
309.6
RHH5229_R3601
1092.0
RHH5258_R3630
647.0
RHH5287_R3659
1108.4
Non-Vd2 gdTCR nTPM: 388.1
Samples: 4
Max nTPM: 573.9
Min nTPM: 223.9
RHH5235_R3607
573.9
RHH5264_R3636
326.4
RHH5207_R3578
223.9
RHH5299_R3665
428.0
T-reg nTPM: 604.8
Samples: 4
Max nTPM: 846.2
Min nTPM: 401.2
RHH5301_R3667
846.2
RHH5237_R3609
401.2
RHH5266_R3638
717.3
RHH5209_R3580
454.3
Terminal effector memory CD4 T-cell nTPM: 411.7
Samples: 2
Max nTPM: 482.0
Min nTPM: 341.4
RHH5243_R3615
482.0
RHH5272_R3644
341.4
Terminal effector memory CD8 T-cell nTPM: 430.5
Samples: 4
Max nTPM: 596.8
Min nTPM: 212.2
RHH5232_R3604
212.2
RHH5204_R3575
596.8
RHH5261_R3633
573.8
RHH5296_R3662
339.0
Vd2 gdTCR nTPM: 684.4
Samples: 4
Max nTPM: 791.3
Min nTPM: 493.2
RHH5234_R3606
493.2
RHH5206_R3577
791.3
RHH5263_R3635
667.2
RHH5298_R3664
785.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.