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RPL23
HPA
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  • TISSUE

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  • RPL23
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1006.1 nTPM
HPA Brain:417.8 nTPM
GTEx:1006.1 nTPM
FANTOM5:420.2 Scaled Tags Per Million
Pig:20.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

417.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 312.9
1981 Female, age 72, midline 385.5
2565 Male, age 75, midline 353.9
2048 Male, age 55, midline 300.2
2816 Male, age 47, midline 263.9
2194 Female, age 79, both hemispheres 260.9
Cervical spinal cord, dorsal horn
nTPM: 347.5
2173 Female, age 72, unknown 426.0
2069 Male, age 47, both hemispheres 423.7
2296 Male, age 66, both hemispheres 393.1
1877 Male, age 55, unknown 354.6
2721 Male, age 90, both hemispheres 270.8
2297 Male, age 75, both hemispheres 216.6
Cervical spinal cord, ventral horn
nTPM: 417.8
2098 Female, age 72, unknown 553.5
2480 Male, age 75, both hemispheres 526.9
2809 Male, age 90, both hemispheres 518.9
2295 Male, age 66, both hemispheres 350.5
2068 Male, age 55, unknown 332.8
2820 Female, age 79, both hemispheres 223.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1006.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1006.1
Samples: 204

Max nTPM: 2038.5
Min nTPM: 477.5
Std nTPM: 277.7
Median nTPM: 962.2
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 2038.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2002.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1858.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1740.5
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 1645.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1585.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1556.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1553.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1550.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1510.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1508.7
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1464.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1460.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1427.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1426.2
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1421.4
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1385.4
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 1384.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1351.9
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1343.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1341.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1338.2
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1335.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1331.6
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1329.6
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1316.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1313.4
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1311.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1308.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1307.3
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1302.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1297.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1296.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1295.6
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 1289.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1288.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1272.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1272.6
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1270.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1246.9
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 1246.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1246.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1240.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1220.3
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 1211.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1201.2
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1195.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1184.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1175.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1166.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1164.2
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1153.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1141.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1137.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1136.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1136.7
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1129.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1128.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1126.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1120.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1118.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1117.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1114.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1112.6
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1111.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1105.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1102.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1092.0
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1089.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1084.2
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1082.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1079.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1079.1
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1078.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1075.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1072.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1068.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1068.4
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1062.8
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1062.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1059.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1057.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1047.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1044.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1040.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1031.3
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1025.5
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1024.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1019.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1018.0
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1015.7
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1012.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1007.4
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1006.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 998.0
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 992.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 989.4
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 986.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 986.3
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 984.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 968.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 964.2
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 960.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 959.4
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 957.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 949.7
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 949.3
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 944.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 944.7
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 943.7
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 936.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 935.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 926.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 926.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 917.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 912.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 911.5
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 910.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 907.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 907.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 905.9
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 902.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 899.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 896.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 896.1
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 895.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 890.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 885.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 885.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 876.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 873.0
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 871.0
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 870.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 869.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 866.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 857.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 855.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 854.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 850.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 848.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 844.8
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 843.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 842.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 839.7
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 836.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 834.5
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 833.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 832.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 832.3
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 831.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 831.3
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 824.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 822.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 817.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 816.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 808.0
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 806.0
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 804.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 803.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 802.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 794.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 789.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 784.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 782.6
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 774.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 763.5
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 758.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 753.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 752.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 740.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 739.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 738.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 735.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 733.0
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 731.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 730.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 710.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 704.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 700.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 692.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 680.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 660.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 658.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 657.7
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 654.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 646.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 642.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 641.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 639.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 636.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 635.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 615.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 608.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 608.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 605.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 602.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 596.0
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 595.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 588.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 583.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 564.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 559.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 510.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 477.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

420.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 420.2
FF:10181-103D1 60 years, female 532.6
FF:10159-103A6 76 years, female 307.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 20.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 15.6
Sample A Female 25.6
Sample B Female 22.7
Sample C Male 15.6
Sample D Male 16.0
Ventral spinal cord
nTPM: 18.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 13.1
Sample A Female 23.8
Sample B Female 21.6
Sample C Male 13.1
Sample D Male 16.6

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