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  • TISSUE

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  • DAD1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:165.1 nTPM
HPA Brain:173.7 nTPM
GTEx:165.1 nTPM
Pig:70.0 nTPM
Mouse:167.9 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 105.0
2226 Male, age 75, left hemisphere 124.4
1961 Female, age 42, unknown 85.7
Dorsomedial nucleus
nTPM: 104.5
2041 Female, age 72, unknown 111.4
1989 Male, age 62, unknown 105.7
2017 Female, age 42, unknown 96.3
Lateral hypothalamic area
nTPM: 119.5
1791 Male, age 80, right hemisphere 146.0
2271 Male, age 75, both hemispheres 132.1
2228 Male, age 66, unknown 111.9
2412 Male, age 62, unknown 87.9
Mammillary body
nTPM: 133.1
1923 Female, age 72, unknown 155.1
2413 Male, age 66, unknown 133.2
1945 Male, age 80, right hemisphere 129.1
1834 Female, age 42, unknown 128.2
1948 Female, age 72, unknown 119.8
Paraventricular nucleus
nTPM: 96.2
2700 Male, age 62, unknown 96.2
Preoptic area
nTPM: 100.7
2414 Female, age 72, unknown 105.6
1861 Female, age 42, unknown 103.5
1907 Male, age 80, right hemisphere 93.2
Supraoptic nucleus
nTPM: 173.7
1894 Female, age 72, unknown 196.6
2043 Male, age 62, unknown 186.6
2835 Female, age 72, unknown 137.8
Ventromedial nucleus
nTPM: 90.3
1982 Female, age 72, unknown 92.3
1822 Female, age 42, unknown 88.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

165.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 165.1
Samples: 257

Max nTPM: 375.2
Min nTPM: 89.8
Std nTPM: 38.1
Median nTPM: 157.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 375.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 312.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 309.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 297.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 273.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 267.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 251.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 250.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 247.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 243.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 235.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 234.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 233.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 233.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 232.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 231.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 227.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 221.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 219.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 218.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 218.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 218.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 216.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 214.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 213.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 213.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 213.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 212.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 212.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 212.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 210.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 205.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 205.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 204.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 203.9
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 203.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 202.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 201.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 199.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 198.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 197.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 197.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 197.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 196.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 195.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 195.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 194.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 194.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 194.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 193.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 193.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 192.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 192.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 190.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 189.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 187.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 186.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 186.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 185.3
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 184.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 183.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 183.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 182.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 182.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 181.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 181.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 179.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 178.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 178.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 177.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 176.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 176.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 175.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 175.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 175.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 175.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 174.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 174.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 174.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 174.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 174.1
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 173.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 173.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 173.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 172.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 172.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 172.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 171.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 171.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 171.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 169.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 169.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 168.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 168.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 167.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 166.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 166.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 166.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 166.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 165.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 165.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 165.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 165.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 164.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 164.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 163.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 163.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 163.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 163.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 163.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 162.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 162.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 161.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 161.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 161.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 161.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 161.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 161.0
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 161.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 160.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 159.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 159.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 159.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 159.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 159.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 158.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 158.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 158.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 157.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 157.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 157.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 157.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 156.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 156.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 156.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 155.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 155.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 154.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 154.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 153.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 153.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 153.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 153.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 153.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 153.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 153.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 153.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 153.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 152.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 152.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 151.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 151.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 151.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 151.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 151.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 150.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 150.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 149.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 149.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 148.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 148.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 147.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 147.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 147.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 146.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 146.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 146.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 146.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 146.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 145.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 145.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 145.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 144.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 144.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 144.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 144.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 144.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 144.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 144.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 143.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 143.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 143.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 143.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 143.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 142.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 142.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 141.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 140.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 140.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 140.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 139.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 139.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 139.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 139.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 139.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 139.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 138.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 138.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 138.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 138.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 138.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 138.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 137.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 137.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 137.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 136.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 136.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 135.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 135.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 135.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 134.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 133.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 133.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 132.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 132.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 132.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 132.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 132.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 131.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 130.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 130.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 130.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 130.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 130.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 129.7
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 129.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 126.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 126.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 126.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 126.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 126.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 126.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 125.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 124.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 124.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 124.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 123.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 123.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 122.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 121.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 120.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 119.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 119.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 119.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 119.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 118.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 117.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 117.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 117.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 115.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 114.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 112.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 111.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 108.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 104.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 101.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 89.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 70.0
Samples: 4

Max nTPM: 85.7
Min nTPM: 51.3
Sample A Female 85.7
Sample B Female 69.8
Sample C Male 73.2
Sample D Male 51.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 167.9
Samples: 4

Max nTPM: 173.2
Min nTPM: 160.9
Sample A Male 165.2
Sample B Male 173.2
Sample C Female 172.1
Sample D Female 160.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.8
69838004 Antisense, RP_050224_01_E09, Mouse strain C57BL/6J (56 days, male) 2.6
74819345 Antisense, RP_060315_02_E12, Mouse strain C57BL/6J (56 days, male) 1.0

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