HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:603.7 nTPM
HPA Brain:143.6 nTPM
GTEx:603.7 nTPM
FANTOM5:28.9 Scaled Tags Per Million
Pig:95.0 nTPM
Mouse:326.5 nTPM
Allen mouse:8.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047103
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 143.6
Sample id Sample description nTPM
Hippocampus
nTPM: 143.6
2529 Female, age 94, left hemisphere 175.4
1898 Male, age 80, left hemisphere 162.9
1911 Female, age 85, right hemisphere 142.3
2621 Female, age 67, right hemisphere 131.7
1855 Male, age 76, left hemisphere 128.2
2148 Female, age 91, left hemisphere 120.8
Dentate gyrus
nTPM: 137.5
2010 Male, age 76, both hemispheres 170.0
2530 Female, age 94, left hemisphere 163.5
2246 Female, age 85, both hemispheres 149.7
2531 Female, age 67, both hemispheres 133.5
1927 Female, age 91, both hemispheres 109.1
2528 Male, age 74, both hemispheres 99.0
Entorhinal gyrus
nTPM: 132.8
2686 Male, age 75, right hemisphere 167.6
2117 Female, age 91, right hemisphere 155.5
1787 Male, age 76, left hemisphere 141.3
2764 Male, age 80, right hemisphere 127.5
1938 Female, age 85, left hemisphere 126.6
2613 Female, age 94, left hemisphere 78.4
Hippocampus, CA1
nTPM: 125.1
2527 Male, age 74, both hemispheres 137.1
2045 Male, age 76, both hemispheres 136.3
1873 Female, age 85, both hemispheres 130.8
2082 Female, age 91, right hemisphere 114.9
2749 Male, age 80, left hemisphere 106.2
Hippocampus, CA2
nTPM: 130.6
2437 Female, age 94, left hemisphere 146.4
1940 Female, age 85, left hemisphere 146.1
1892 Male, age 76, both hemispheres 132.9
2113 Female, age 91, right hemisphere 122.3
1963 Male, age 80, left hemisphere 121.7
2249 Male, age 74, both hemispheres 114.3
Hippocampus, CA3
nTPM: 116.7
1891 Female, age 85, both hemispheres 151.6
1867 Male, age 76, both hemispheres 140.2
2861 Female, age 67, both hemispheres 115.1
2436 Male, age 74, both hemispheres 111.0
2137 Male, age 80, left hemisphere 96.6
2620 Female, age 94, left hemisphere 85.5
Parahippocampal cortex
nTPM: 123.3
2018 Male, age 76, both hemispheres 173.8
2245 Female, age 91, both hemispheres 134.7
1990 Female, age 91, right hemisphere 129.9
1850 Male, age 80, both hemispheres 128.1
2250 Female, age 67, right hemisphere 123.3
1933 Female, age 85, both hemispheres 121.5
2532 Female, age 72, left hemisphere 119.9
2692 Male, age 74, both hemispheres 112.1
2693 Female, age 94, both hemispheres 95.1
2622 Female, age 67, right hemisphere 94.3
Perirhinal gyrus
nTPM: 127.0
1841 Female, age 85, right hemisphere 138.0
1794 Male, age 80, right hemisphere 131.4
2848 Male, age 76, right hemisphere 123.5
2521 Female, age 94, right hemisphere 123.3
1847 Female, age 91, left hemisphere 119.1
Subiculum
nTPM: 140.4
2042 Male, age 76, both hemispheres 164.1
1977 Female, age 85, both hemispheres 154.6
2438 Female, age 94, left hemisphere 151.6
1901 Male, age 80, both hemispheres 138.3
2729 Female, age 91, right hemisphere 117.1
2619 Male, age 74, both hemispheres 116.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 603.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 603.7
Samples: 255

Max nTPM: 1689.6
Min nTPM: 251.0
Std nTPM: 203.2
Median nTPM: 559.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1689.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1390.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1312.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1242.0
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1185.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1166.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1128.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1126.5
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1032.1
GTEX-11TTK-0011-R1b-SM-GIN92 60-69 years, female 1012.8
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1005.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.9
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 22.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 95.0
Pig sample Sample description nTPM
Subiculum
nTPM: 88.2
Samples: 4

Max nTPM: 119.2
Min nTPM: 70.5
Sample A Female 119.2
Sample B Female 86.7
Sample C Male 70.5
Sample D Male 76.2
Dorsal hippocampus
nTPM: 95.0
Samples: 4

Max nTPM: 116.1
Min nTPM: 70.0
Sample A Female 113.9
Sample B Female 70.0
Sample C Male 116.1
Sample D Male 79.9
Entorhinal cortex
nTPM: 92.5
Samples: 4

Max nTPM: 106.0
Min nTPM: 80.6
Sample A Female 83.1
Sample B Female 106.0
Sample C Male 100.4
Sample D Male 80.6
Ventral hippocampus
nTPM: 80.3
Samples: 4

Max nTPM: 85.0
Min nTPM: 75.2
Sample A Female 80.8
Sample B Female 75.2
Sample C Male 85.0
Sample D Male 80.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 326.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 309.3
Samples: 4

Max nTPM: 336.1
Min nTPM: 293.1
Sample A Male 293.1
Sample B Male 302.2
Sample C Female 336.1
Sample D Female 305.7
Hippocampal formation
nTPM: 326.5
Samples: 4

Max nTPM: 381.6
Min nTPM: 305.5
Sample A Male 381.6
Sample B Male 305.5
Sample C Female 308.3
Sample D Female 310.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
68862012 Antisense, RP_050301_01_C11, Mouse strain C57BL/6J (56 days, male) 8.8
74357560 Antisense, RP_051214_01_B11, Mouse strain C57BL/6J (56 days, male) 7.4

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