On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
568.6
nTPM
HPA Brain:
227.2
nTPM
GTEx:
568.6
nTPM
Macaque:
378.5
nTPM
Mouse:
231.5
nTPM
Rat:
112.5
nTPM
Pig:
82.5
nTPM
HYPOTHALAMUS - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Unassigned AVP+
c-2
Excitatory (VGLUT2) TAC1+
c-3
Inhibitory (GAD1/2) AVP+
c-4
Unassigned AVP+
c-5
Excitatory (VGLUT2)
c-6
Excitatory (VGLUT2)
c-7
Inhibitory (GAD1/2) DRD2+ L...
c-8
Inhibitory (GAD1/2) ESR1+
c-9
Excitatory (VGLUT2)
c-10
Excitatory (VGLUT2) TAC1+
c-11
Inhibitory (GAD1/2) ESR1+
c-12
Inhibitory (GAD1/2) DRD1+ L...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2)
c-15
Excitatory (VGLUT2)
c-16
Excitatory (VGLUT2)
c-17
Inhibitory (GAD1/2)
c-18
Inhibitory (GAD1/2) GAL+
c-19
Excitatory (VGLUT1)
c-20
Excitatory (VGLUT2) ESR1+
c-21
Inhibitory (GAD1/2) DRD1+ L...
c-22
Inhibitory (GAD1/2) RORB+ K
c-23
Inhibitory (GAD1/2) SST+ NP
c-24
Inhibitory (GAD1/2) CXCL14+
c-25
Excitatory (VGLUT2)
c-26
Inhibitory (GAD1/2)
c-27
Excitatory (VGLUT2)
c-28
Unassigned
c-29
Inhibitory (GAD1/2) ESR1+
c-30
Excitatory (VGLUT2)
c-31
Excitatory (VGLUT1/2)
c-32
Inhibitory (GAD1/2) GAL+
c-33
Excitatory (VGLUT2)
c-34
Monoaminergic Inhibitory (G...
c-35
Excitatory (VGLUT2) TAC1+
c-36
Inhibitory (GAD1/2) LHX6+ T...
c-37
Excitatory (VGLUT2)
c-38
Inhibitory (GAD1/2) SST+
c-39
Inhibitory (GAD1/2) MEIS2+
c-40
Unassigned
c-41
Inhibitory (GAD1/2) SST+
c-42
Excitatory (VGLUT1)
c-43
Excitatory (VGLUT2) TAC1+
c-44
Unassigned AVP+
c-45
Inhibitory (GAD1/2) LAMP5+ ...
c-46
Excitatory (VGLUT2)
c-47
Inhibitory (GAD1/2) LHX6+ T...
c-48
Parvocellular CRH+ AVP+ OXT
c-49
Magnocellular TH+ AVP+ OXT+
c-50
Excitatory (VGLUT1)
c-51
Parvocellular (VGLUT2) AVP...
c-52
Inhibitory (GAD1/2) NOS1+ M...
c-53
Inhibitory (GAD1/2) TAC1+ D...
c-54
Inhibitory (GAD1/2) SST+
c-55
Excitatory (VGLUT1)
c-56
Excitatory (VGLUT1) ETV1+ Z...
c-57
HCRT+ RXF4+
c-58
Excitatory (VGLUT1/2) TAC1+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - HYPOTHALAMUS, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes (LHX2+)
c-5
Microglia
c-6
Oligodendrocytes
c-7
Astrocytes (CD44+)
c-8
Oligodendrocytes
c-9
Oligodendrocyte progenitor ...
c-10
Microglia
c-11
Oligodendrocytes
c-12
Astrocytes
c-13
Astrocytes (CD44+)
c-14
Oligodendrocyte progenitor ...
c-15
Oligodendrocyte progenitor ...
c-16
Microglia
c-17
Oligodendrocytes
c-18
Oligodendrocyte progenitor ...
c-19
Astrocytes
c-20
Fibroblasts
c-21
Oligodendrocytes
c-22
Oligodendrocytes
c-23
Ependymal cells
c-24
Vascular endothelial cells
c-25
Astrocytes (LHX2+)
c-26
Macrophages
c-27
Astrocytes
c-28
T-cells
c-29
Vascular smooth muscle cell
c-30
Fibroblasts (BNC2+ KCNMA1+ ...
c-31
Pericytes
c-32
Oligodendrocyte progenitor ...
c-33
Immature oligodendrocytes
c-34
Oligodendrocyte progenitor ...
c-35
NK-cells
c-36
Mural cells
c-37
Monocytes
c-38
Fibroblasts (BNC2+ TRPM3+)
c-39
Lymphocytes
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
227.2
Sample id
Sample description
nTPM
Arcuate nucleus nTPM: 150.4
1961
Female, age 42, unknown
157.3
2226
Male, age 75, left hemisphere
143.5
Dorsomedial nucleus nTPM: 145.1
2041
Female, age 72, unknown
163.7
2017
Female, age 42, unknown
141.7
1989
Male, age 62, unknown
129.9
Lateral hypothalamic area nTPM: 172.1
2228
Male, age 66, unknown
196.4
1791
Male, age 80, right hemisphere
176.4
2271
Male, age 75, both hemispheres
163.9
2412
Male, age 62, unknown
151.5
Mammillary body nTPM: 179.7
1948
Female, age 72, unknown
206.9
1945
Male, age 80, right hemisphere
189.1
1834
Female, age 42, unknown
182.9
1923
Female, age 72, unknown
175.0
2413
Male, age 66, unknown
144.4
Paraventricular nucleus nTPM: 186.1
2700
Male, age 62, unknown
186.1
Preoptic area nTPM: 141.1
1861
Female, age 42, unknown
155.5
2414
Female, age 72, unknown
144.3
1907
Male, age 80, right hemisphere
123.4
Supraoptic nucleus nTPM: 227.2
1894
Female, age 72, unknown
258.7
2043
Male, age 62, unknown
222.1
2835
Female, age 72, unknown
200.6
Ventromedial nucleus nTPM: 163.3
1982
Female, age 72, unknown
184.7
1822
Female, age 42, unknown
141.8
HYPOTHALAMUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
568.6
GTEx sample id
Sample description
nTPM
Brain - Hypothalamus Average nTPM: 568.6
Samples: 257
Max nTPM: 2169.9
Min nTPM: 255.0
Std nTPM: 247.3
Median nTPM: 508.3
GTEX-11ZU8-0011-R8b-SM-GHWOM
60-69 years, male
2169.9
GTEX-139TS-0011-R8a-SM-5J1NP
60-69 years, male
1961.0
GTEX-14753-0011-R8b-SM-5S2U1
60-69 years, male
1658.0
GTEX-144GL-0011-R8a-SM-5Q5B1
50-59 years, male
1396.0
GTEX-11EMC-0011-R8b-SM-DO91Z
60-69 years, female
1280.0
GTEX-X4XY-0011-R8A-SM-46MVC
60-69 years, male
1249.7
GTEX-1JN6P-0011-R8a-SM-F6499
60-69 years, male
1228.6
GTEX-1GN1V-0011-R8a-SM-CKZNV
60-69 years, male
1105.3
GTEX-11EI6-0011-R8a-SM-DO93M
60-69 years, male
1100.0
GTEX-1B8SF-0011-R8b-SM-7P8SX
60-69 years, male
1017.5
GTEX-1O9I2-0011-R8a-SM-F2TAX
50-59 years, male
1014.2
GTEX-1QEPI-0011-R8a-SM-G8LLI
60-69 years, female
1012.7
GTEX-15DCD-0011-R8b-SM-7KUEF
70-79 years, female
989.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ
60-69 years, male
981.9
GTEX-RNOR-0011-R8A-SM-EZ6MN
50-59 years, female
956.6
GTEX-1C64N-0011-R8b-SM-7MGXE
50-59 years, male
949.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT
50-59 years, male
935.4
GTEX-1CAV2-0011-R8a-SM-GRR24
40-49 years, female
907.9
GTEX-12WSD-0011-R8b-SM-9QEGI
60-69 years, female
882.0
GTEX-12126-0011-R8a-SM-GI4WV
20-29 years, male
880.9
GTEX-WL46-0011-R8B-SM-H7OHG
50-59 years, male
876.5
GTEX-1CAMQ-0011-R8a-SM-ARU85
40-49 years, male
876.0
GTEX-1PPGY-0011-R8a-SM-F649R
60-69 years, male
872.0
GTEX-1B8SG-0011-R8b-SM-7IGNW
50-59 years, male
866.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ
50-59 years, male
837.6
GTEX-XMD1-0011-R8A-SM-4AT48
60-69 years, male
833.9
GTEX-1CB4H-0011-R8b-SM-CJI26
60-69 years, female
826.8
GTEX-11DZ1-0011-R8b-SM-DNZZI
50-59 years, male
826.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4
60-69 years, male
815.0
GTEX-11H98-0011-R8a-SM-5NQ8V
50-59 years, male
813.0
GTEX-1QP6S-0011-R8a-SM-F649M
40-49 years, male
810.2
GTEX-OXRN-0011-R8A-SM-E9TI1
50-59 years, male
808.6
GTEX-14E7W-0011-R8b-SM-GQ1D6
70-79 years, male
807.6
GTEX-1H23P-0011-R8b-SM-A9G1G
60-69 years, male
801.8
GTEX-N7MS-0011-R8a-SM-2YUMK
60-69 years, male
800.2
GTEX-13NYS-0011-R8a-SM-5MR5H
60-69 years, male
791.4
GTEX-1CB4J-0011-R8a-SM-9QEHU
60-69 years, male
791.1
GTEX-1N5O9-0011-R8a-SM-F649C
60-69 years, male
791.0
GTEX-1JJEA-0011-R8a-SM-F3419
60-69 years, male
781.6
GTEX-1RAZS-0011-R8a-SM-F2TBI
50-59 years, male
780.1
GTEX-11TTK-0011-R8b-SM-DO111
60-69 years, female
772.7
GTEX-ZF28-0011-R8a-SM-4WWFW
60-69 years, male
768.1
GTEX-ZYY3-0011-R8a-SM-H7OHF
60-69 years, female
763.0
GTEX-11DYG-0011-R8a-SM-DO93F
60-69 years, male
762.7
GTEX-QVJO-0011-R8A-SM-447C7
60-69 years, female
762.3
GTEX-1RQED-0011-R8a-SM-G8LKO
60-69 years, male
761.7
GTEX-1F6I4-0011-R8a-SM-9QEIA
60-69 years, male
749.3
GTEX-1I1GS-0011-R8b-SM-CKZPE
60-69 years, male
743.7
GTEX-1POEN-0011-R8b-SM-F647O
30-39 years, female
741.4
GTEX-13OVJ-0011-R8b-SM-5L3FS
50-59 years, female
731.3
GTEX-1445S-0011-R8a-SM-5PNWX
60-69 years, male
729.2
GTEX-13FLW-0011-R8b-SM-5J1MZ
50-59 years, male
723.0
GTEX-WVLH-0011-R8A-SM-3MJFC
50-59 years, male
717.7
GTEX-1JMPZ-0011-R8b-SM-F341A
30-39 years, male
711.7
GTEX-1JMOU-0011-R8b-SM-F2TA9
60-69 years, female
708.2
GTEX-WWYW-0011-R8A-SM-3NB3S
50-59 years, female
689.3
GTEX-1R9K4-0011-R8b-SM-F649L
60-69 years, male
682.6
GTEX-1H3O1-0011-R8a-SM-CL555
60-69 years, male
678.9
GTEX-1JMQK-0011-R8a-SM-G8LMS
60-69 years, male
673.4
GTEX-132Q8-0011-R8b-SM-5DUWX
60-69 years, male
669.4
GTEX-18465-0011-R8b-SM-7LG6O
50-59 years, male
666.5
GTEX-13SLX-0011-R8b-SM-5PNWZ
50-59 years, female
662.3
GTEX-17EVQ-0011-R8a-SM-7189T
70-79 years, male
657.6
GTEX-16XZZ-0011-R8b-SM-7LT8S
60-69 years, male
656.2
GTEX-QDT8-0011-R8A-SM-G8W63
30-39 years, female
654.1
GTEX-1IY9M-0011-R8a-SM-EYYWW
60-69 years, male
653.3
GTEX-1JN1M-0011-R8b-SM-F6485
60-69 years, female
653.3
GTEX-1H1CY-0011-R8b-SM-CJI31
60-69 years, female
649.9
GTEX-12696-0011-R8a-SM-GINAP
60-69 years, male
638.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA
70-79 years, male
624.6
GTEX-1F75A-0011-R8a-SM-CL539
50-59 years, male
612.1
GTEX-13X6I-0011-R8a-SM-5PNZF
60-69 years, male
610.5
GTEX-15G19-0011-R8b-SM-7KUL1
60-69 years, male
605.6
GTEX-1NV5F-0011-R8b-SM-F647Z
60-69 years, female
602.0
GTEX-ZAB4-0011-R8b-SM-4SOKF
40-49 years, male
600.5
GTEX-1N2DW-0011-R8a-SM-EY5YD
50-59 years, male
599.7
GTEX-1477Z-0011-R8b-SM-5S2RG
60-69 years, male
592.3
GTEX-1C6WA-0011-R8b-SM-7P8S7
60-69 years, male
587.3
GTEX-12WSA-0011-R8a-SM-5P9EX
60-69 years, male
585.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG
60-69 years, female
585.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT
50-59 years, male
578.6
GTEX-1KANB-0011-R8a-SM-F3K5N
50-59 years, male
578.1
GTEX-13QJC-0011-R8b-SM-5S2U6
60-69 years, female
577.7
GTEX-11GSP-0011-R8b-SM-5NQ79
60-69 years, female
577.6
GTEX-1MA7X-0011-R8a-SM-G9EQD
60-69 years, male
577.4
GTEX-1A8G7-0011-R8a-SM-7P8S6
60-69 years, male
575.1
GTEX-1LVAO-0011-R8a-SM-F3K5J
60-69 years, male
573.7
GTEX-1GF9W-0011-R8b-SM-9QEIR
60-69 years, male
570.1
GTEX-14LZ3-0011-R8b-SM-COH3M
60-69 years, female
567.4
GTEX-1H1DG-0011-R8a-SM-CL54Z
70-79 years, male
559.6
GTEX-1CB4G-0011-R8b-SM-9WG7H
60-69 years, male
558.8
GTEX-1EMGI-0011-R8b-SM-9QEID
60-69 years, male
558.6
GTEX-1PWST-0011-R8a-SM-F3K5P
70-79 years, male
556.7
GTEX-1LKK1-0011-R8a-SM-F341O
50-59 years, female
556.6
GTEX-1HBPH-0011-R8b-SM-CL556
40-49 years, female
553.9
GTEX-1HCU6-0011-R8a-SM-CJI3R
60-69 years, female
553.7
GTEX-1RLM8-0011-R8a-SM-EYYXR
50-59 years, male
551.9
GTEX-ZVT3-0011-R8b-SM-57WDJ
60-69 years, female
551.8
GTEX-13OW8-0011-R8a-SM-5L3G5
60-69 years, male
551.6
GTEX-14PQA-0011-R8b-SM-6AJAB
50-59 years, female
548.2
GTEX-13OW5-0011-R8a-SM-5L3GQ
60-69 years, male
547.3
GTEX-1HBPI-0011-R8a-SM-A9G1S
50-59 years, male
545.9
GTEX-1GZHY-0011-R8b-SM-9OSWK
50-59 years, female
545.0
GTEX-1QMI2-0011-R8a-SM-F3429
60-69 years, male
542.9
GTEX-T6MN-0011-R8A-SM-32QP3
50-59 years, male
541.9
GTEX-1E2YA-0011-R8a-SM-CKZNG
50-59 years, male
540.3
GTEX-YJ89-0011-R8b-SM-4SOK8
60-69 years, male
539.5
GTEX-1HGF4-0011-R8b-SM-CKZP9
60-69 years, male
536.7
GTEX-1RQEC-0011-R8b-SM-F648X
60-69 years, male
535.4
GTEX-WHSE-0011-R8A-SM-3P5Z1
20-29 years, male
533.2
GTEX-16NPV-0011-R8a-SM-7EPH8
50-59 years, female
529.2
GTEX-1I1CD-0011-R8b-SM-CJI3X
60-69 years, female
527.8
GTEX-S7SE-0011-R8A-SM-F649T
50-59 years, male
526.6
GTEX-13PDP-0011-R8b-SM-5O9CS
60-69 years, male
524.9
GTEX-11WQK-0011-R8a-SM-5BC7C
50-59 years, male
522.7
GTEX-1F75W-0011-R8a-SM-9QEI4
60-69 years, male
522.3
GTEX-1IKOH-0011-R8a-SM-A9SKG
60-69 years, female
522.3
GTEX-13JVG-0011-R8a-SM-5KM3E
60-69 years, male
520.2
GTEX-1GMR8-0011-R8a-SM-CKZNX
50-59 years, female
519.9
GTEX-11GS4-0011-R8b-SM-GI4XA
60-69 years, male
518.0
GTEX-1GZ4I-0011-R8b-SM-9WG76
50-59 years, male
517.7
GTEX-1F88E-0011-R8a-SM-CJI2H
60-69 years, female
517.5
GTEX-1HCVE-0011-R8a-SM-ARU7A
50-59 years, male
515.7
GTEX-X261-0011-R8A-SM-4E3I5
50-59 years, male
515.6
GTEX-1A8G6-0011-R8a-SM-7P8PD
60-69 years, male
512.3
GTEX-P44H-0011-R8A-SM-2XCEL
40-49 years, male
512.3
GTEX-11ZTS-0011-R8a-SM-57WDI
60-69 years, female
509.9
GTEX-13112-0011-R8b-SM-664OV
50-59 years, male
508.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW
50-59 years, male
508.3
GTEX-1KWVE-0011-R8a-SM-F3K4V
30-39 years, male
505.7
GTEX-13X6J-0011-R8b-SM-5PNUA
50-59 years, male
504.0
GTEX-1R46S-0011-R8a-SM-F3K4Q
60-69 years, female
501.6
GTEX-1RDX4-0011-R8a-SM-G8LLT
50-59 years, female
501.5
GTEX-11O72-0011-R8a-SM-GJ3R9
40-49 years, male
500.8
GTEX-1GN1U-0011-R8a-SM-CL537
50-59 years, female
498.8
GTEX-16GPK-0011-R8a-SM-79OMQ
60-69 years, male
496.2
GTEX-1N2EF-0011-R8a-SM-F6481
60-69 years, male
494.6
GTEX-131XW-0011-R8a-SM-5DUWY
50-59 years, female
491.4
GTEX-1313W-0011-R8a-SM-5DUVM
50-59 years, female
491.2
GTEX-ZVZQ-0011-R8a-SM-51MR5
60-69 years, female
488.1
GTEX-1I1HK-0011-R8b-SM-E8VN9
60-69 years, male
487.2
GTEX-1LSVX-0011-R8a-SM-F2TB3
60-69 years, male
485.6
GTEX-13O3O-0011-R8b-SM-5LUAL
60-69 years, female
484.9
GTEX-15DYW-0011-R8b-SM-GRR3B
60-69 years, female
482.5
GTEX-117XS-0011-R8b-SM-GHWOD
60-69 years, male
480.0
GTEX-14PJO-0011-R8a-SM-6AJAL
60-69 years, male
478.2
GTEX-15SHU-0011-R8a-SM-H6Q7V
40-49 years, female
477.9
GTEX-PWO3-0011-R8A-SM-2I5GD
60-69 years, female
476.9
GTEX-1BAJH-0011-R8a-SM-7MXUB
70-79 years, male
476.8
GTEX-131XH-0011-R8a-SM-5EGLL
50-59 years, male
476.7
GTEX-15CHQ-0011-R8b-SM-CNPO4
60-69 years, male
476.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE
40-49 years, female
474.6
GTEX-YFC4-0011-R8a-SM-4SOK3
40-49 years, female
474.1
GTEX-13CIG-0011-R8b-SM-5LZX5
50-59 years, male
472.3
GTEX-145LU-0011-R8b-SM-5PNZG
50-59 years, male
469.8
GTEX-13FXS-0011-R8a-SM-5J1MN
50-59 years, male
469.5
GTEX-NL4W-0011-R8a-SM-2I3G4
50-59 years, male
469.5
GTEX-ZAK1-0011-R8a-SM-H7OGE
50-59 years, female
468.8
GTEX-13VXU-0011-R8b-SM-GJ3RR
50-59 years, male
467.7
GTEX-117YW-0011-R8a-SM-GINAB
50-59 years, male
466.6
GTEX-11DXW-0011-R8a-SM-GIN8T
40-49 years, male
466.3
GTEX-13OVL-0011-R8a-SM-5L3HH
50-59 years, male
466.2
GTEX-11NV4-0011-R8b-SM-GHWO4
60-69 years, male
465.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J
60-69 years, male
464.0
GTEX-15RJE-0011-R8a-SM-H7OGM
40-49 years, male
463.5
GTEX-14C5O-0011-R8a-SM-5YYAG
60-69 years, male
462.6
GTEX-1OJC4-0011-R8a-SM-F3K5B
50-59 years, female
462.6
GTEX-111FC-0011-R8b-SM-GI4VS
60-69 years, male
459.9
GTEX-11WQC-0011-R8b-SM-57WCH
60-69 years, male
457.4
GTEX-1GN2E-0011-R8a-SM-CE6RK
60-69 years, male
455.0
GTEX-1HFI6-0011-R8a-SM-ARZLP
40-49 years, male
451.8
GTEX-145MH-0011-R8a-SM-5PNUL
50-59 years, male
450.6
GTEX-RVPV-0011-R8A-SM-F21II
60-69 years, male
449.4
GTEX-1MCQQ-0011-R8b-SM-F341H
60-69 years, male
444.9
GTEX-1F52S-0011-R8a-SM-9OSXA
60-69 years, female
443.3
GTEX-16Z82-0011-R8a-SM-7DUEX
60-69 years, male
441.8
GTEX-17F97-0011-R8a-SM-7DUET
50-59 years, male
441.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO
40-49 years, male
440.3
GTEX-1R9PO-0011-R8a-SM-F2TA3
60-69 years, female
439.8
GTEX-14PN4-0011-R8a-SM-6EU1H
50-59 years, male
439.3
GTEX-15EO6-0011-R8a-SM-H6Q6R
50-59 years, male
438.9
GTEX-14BIL-0011-R8b-SM-69LQK
50-59 years, male
438.5
GTEX-1192X-0011-R8b-SM-DO11U
50-59 years, male
437.1
GTEX-14JIY-0011-R8a-SM-6AJAP
60-69 years, male
435.5
GTEX-1A3MX-0011-R8a-SM-7P8PI
60-69 years, male
435.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ
60-69 years, male
435.1
GTEX-ZXG5-0011-R8a-SM-57WD1
60-69 years, male
433.0
GTEX-1LH75-0011-R8b-SM-F2TB2
50-59 years, female
432.7
GTEX-13CF2-0011-R8b-SM-5IJCX
60-69 years, male
432.3
GTEX-1399T-0011-R8b-SM-5IJD8
60-69 years, male
428.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6
60-69 years, male
427.6
GTEX-ZUA1-0011-R8b-SM-51MST
40-49 years, male
427.4
GTEX-Z93S-0011-R8a-SM-4RGNL
50-59 years, male
425.4
GTEX-13X6K-0011-R8b-SM-5PNZ4
60-69 years, female
420.9
GTEX-1F48J-0011-R8a-SM-9OSWW
50-59 years, female
420.9
GTEX-13NYB-0011-R8a-SM-5KM4R
40-49 years, male
408.7
GTEX-11DXY-0011-R8a-SM-DO11M
60-69 years, male
408.3
GTEX-X4XX-0011-R8B-SM-46MWM
60-69 years, male
408.0
GTEX-1IDJH-0011-R8b-SM-ARZLL
70-79 years, male
407.0
GTEX-1HT8W-0011-R8b-SM-CM2SX
30-39 years, male
406.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K
50-59 years, female
404.7
GTEX-11ZUS-0011-R8a-SM-5BC73
30-39 years, male
404.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E
60-69 years, male
401.7
GTEX-147F4-0011-R8b-SM-5S2UN
50-59 years, male
400.4
GTEX-1GN73-0011-R8b-SM-CKZNY
60-69 years, male
399.5
GTEX-1KD4Q-0011-R8a-SM-F341N
40-49 years, male
399.3
GTEX-13FLV-0011-R8a-SM-5LZZE
50-59 years, male
397.7
GTEX-QVUS-0011-R8A-SM-3GAD7
60-69 years, female
394.5
GTEX-ZDXO-0011-R8a-SM-4WWD7
60-69 years, male
394.3
GTEX-13OVH-0011-R8b-SM-5MR35
70-79 years, male
389.3
GTEX-13RTJ-0011-R8b-SM-5O9DL
60-69 years, male
389.0
GTEX-11ONC-0011-R8b-SM-5NQ87
60-69 years, male
388.5
GTEX-1B933-0011-R8a-SM-9QEGX
50-59 years, female
387.8
GTEX-1N2EE-0011-R8a-SM-F3K4X
60-69 years, male
385.4
GTEX-1B8L1-0011-R8b-SM-7P8ST
60-69 years, male
385.0
GTEX-13QIC-0011-R8b-SM-5O9CV
60-69 years, female
383.8
GTEX-145LS-0011-R8b-SM-5PNXA
60-69 years, female
383.3
GTEX-11OF3-0011-R8b-SM-57WCS
60-69 years, male
378.6
GTEX-12WSM-0011-R8a-SM-5DUWJ
60-69 years, male
374.0
GTEX-1P4AB-0011-R8a-SM-F341R
50-59 years, male
373.4
GTEX-1HSKV-0011-R8a-SM-CL54X
60-69 years, male
370.5
GTEX-13O3Q-0011-R8b-SM-5KM2J
50-59 years, male
370.4
GTEX-11GSO-0011-R8b-SM-GJ3PM
60-69 years, male
369.0
GTEX-NPJ8-0011-R8a-SM-2HMLG
40-49 years, male
368.6
GTEX-1IKK5-0011-R8b-SM-CJI45
60-69 years, male
365.9
GTEX-17HII-0011-R8a-SM-79OK6
50-59 years, male
361.8
GTEX-14BMV-0011-R8a-SM-G9ERM
50-59 years, male
359.3
GTEX-13NZA-0011-R8b-SM-5KM2Q
60-69 years, male
357.9
GTEX-14PJM-0011-R8b-SM-69LPD
50-59 years, female
357.9
GTEX-16YQH-0011-R8a-SM-7DUFB
30-39 years, male
355.7
GTEX-1GTWX-0011-R8a-SM-CE6RM
60-69 years, male
347.4
GTEX-14DAQ-0011-R8a-SM-G9ERP
60-69 years, female
346.1
GTEX-1E1VI-0011-R8b-SM-ARU8E
50-59 years, male
345.3
GTEX-1LSNL-0011-R8b-SM-F2TAH
50-59 years, male
342.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C
50-59 years, male
342.3
GTEX-1MJK2-0011-R8a-SM-F341I
50-59 years, male
340.9
GTEX-17HG3-0011-R8a-SM-79OK7
30-39 years, female
339.7
GTEX-12ZZX-0011-R8a-SM-5DUW8
40-49 years, female
334.3
GTEX-13SLW-0011-R8b-SM-5SI64
70-79 years, male
333.8
GTEX-1GF9V-0011-R8b-SM-CE6RB
60-69 years, male
328.8
GTEX-1LVA9-0011-R8a-SM-F3K5G
50-59 years, male
324.4
GTEX-17EVP-0011-R8b-SM-7DUF9
40-49 years, male
315.2
GTEX-WZTO-0011-R8A-SM-4E3II
40-49 years, male
314.9
GTEX-13N1W-0011-R8a-SM-5MR56
70-79 years, male
314.4
GTEX-1C6VR-0011-R8b-SM-7MXUF
60-69 years, male
313.8
GTEX-1F6IF-0011-R8a-SM-9OSX5
60-69 years, male
309.2
GTEX-1HB9E-0011-R8b-SM-A9G1O
50-59 years, male
306.3
GTEX-1B996-0011-R8b-SM-79OOS
60-69 years, male
306.2
GTEX-T5JC-0011-R8A-SM-32PLM
20-29 years, male
303.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS
50-59 years, male
303.8
GTEX-15ER7-0011-R8a-SM-7KUL2
20-29 years, female
294.6
GTEX-13OW7-0011-R8b-SM-5L3HR
50-59 years, male
289.9
GTEX-14ASI-0011-R8b-SM-5S2UB
60-69 years, male
287.1
GTEX-13G51-0011-R8b-SM-5LZZ4
60-69 years, male
279.3
GTEX-X585-0011-R8A-SM-46MUX
50-59 years, male
276.7
GTEX-QMR6-0011-R8A-SM-32PKJ
50-59 years, male
272.1
GTEX-13OW6-0011-R8a-SM-5L3GF
50-59 years, male
255.0
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HYPOTHALAMUS - Macaque RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
378.5
Macaque sample
Sample description
nTPM
Preoptic area nTPM: 378.5
Samples: 1
Max nTPM: 378.5
Min nTPM: 378.5
Sample A
378.5
HYPOTHALAMUS - Pig RNA-seqi
RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
82.5
Pig sample
Sample description
nTPM
Hypothalamus nTPM: 82.5
Samples: 4
Max nTPM: 105.8
Min nTPM: 57.3
Sample A
Female
105.8
Sample B
Female
80.0
Sample C
Male
87.0
Sample D
Male
57.3
HYPOTHALAMUS - Mouse RNA-seqi
RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
231.5
Mouse sample
Sample description
nTPM
Hypothalamus nTPM: 231.5
Samples: 4
Max nTPM: 260.1
Min nTPM: 184.2
Sample A
238.9
Sample B
260.1
Sample C
242.6
Sample D
184.2
HYPOTHALAMUS - Rat RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
112.5
Rat sample
Sample description
nTPM
Hypothalamus nTPM: 112.6
Samples: 4
Max nTPM: 125.1
Min nTPM: 103.9
Sample A
111.2
Sample A
110.0
Sample A
103.9
Sample A
125.1
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The Human Protein Atlas project is funded
