HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:32.3 nTPM
HPA Brain:78.7 nTPM
GTEx:32.3 nTPM
FANTOM5:198.7 Scaled Tags Per Million
Pig:89.4 nTPM
Mouse:137.6 nTPM
Allen mouse:12.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB008375
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 78.7
Sample id Sample description nTPM
Hippocampus
nTPM: 70.5
1855 Male, age 76, left hemisphere 84.6
1898 Male, age 80, left hemisphere 80.7
1911 Female, age 85, right hemisphere 66.9
2148 Female, age 91, left hemisphere 64.8
2529 Female, age 94, left hemisphere 64.3
2621 Female, age 67, right hemisphere 61.5
Dentate gyrus
nTPM: 62.4
2010 Male, age 76, both hemispheres 81.1
1927 Female, age 91, both hemispheres 79.9
2246 Female, age 85, both hemispheres 69.5
2528 Male, age 74, both hemispheres 52.0
2531 Female, age 67, both hemispheres 47.9
2530 Female, age 94, left hemisphere 43.9
Entorhinal gyrus
nTPM: 45.6
1938 Female, age 85, left hemisphere 53.1
2117 Female, age 91, right hemisphere 52.5
1787 Male, age 76, left hemisphere 51.5
2764 Male, age 80, right hemisphere 40.8
2686 Male, age 75, right hemisphere 39.0
2613 Female, age 94, left hemisphere 36.9
Hippocampus, CA1
nTPM: 78.7
2749 Male, age 80, left hemisphere 111.9
1873 Female, age 85, both hemispheres 97.1
2045 Male, age 76, both hemispheres 79.2
2527 Male, age 74, both hemispheres 56.4
2082 Female, age 91, right hemisphere 49.1
Hippocampus, CA2
nTPM: 58.7
1892 Male, age 76, both hemispheres 78.7
1963 Male, age 80, left hemisphere 70.9
1940 Female, age 85, left hemisphere 55.2
2113 Female, age 91, right hemisphere 53.1
2249 Male, age 74, both hemispheres 49.5
2437 Female, age 94, left hemisphere 45.1
Hippocampus, CA3
nTPM: 65.2
2137 Male, age 80, left hemisphere 96.1
1867 Male, age 76, both hemispheres 68.8
1891 Female, age 85, both hemispheres 61.0
2620 Female, age 94, left hemisphere 57.9
2861 Female, age 67, both hemispheres 56.9
2436 Male, age 74, both hemispheres 50.8
Parahippocampal cortex
nTPM: 52.8
2018 Male, age 76, both hemispheres 65.7
2245 Female, age 91, both hemispheres 61.0
2250 Female, age 67, right hemisphere 57.7
1850 Male, age 80, both hemispheres 55.4
1933 Female, age 85, both hemispheres 53.9
2693 Female, age 94, both hemispheres 51.1
2622 Female, age 67, right hemisphere 49.5
1990 Female, age 91, right hemisphere 45.2
2532 Female, age 72, left hemisphere 44.4
2692 Male, age 74, both hemispheres 44.3
Perirhinal gyrus
nTPM: 56.8
1841 Female, age 85, right hemisphere 60.5
1847 Female, age 91, left hemisphere 58.5
1794 Male, age 80, right hemisphere 55.8
2521 Female, age 94, right hemisphere 55.6
2848 Male, age 76, right hemisphere 53.6
Subiculum
nTPM: 56.3
2042 Male, age 76, both hemispheres 64.6
1901 Male, age 80, both hemispheres 61.9
2729 Female, age 91, right hemisphere 59.2
2438 Female, age 94, left hemisphere 55.2
2619 Male, age 74, both hemispheres 49.3
1977 Female, age 85, both hemispheres 47.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 32.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.3
Samples: 197

Max nTPM: 76.8
Min nTPM: 13.9
Std nTPM: 10.6
Median nTPM: 31.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 76.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 66.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 65.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 60.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 57.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 56.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 55.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 55.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 53.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 52.7
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 198.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 198.7
FF:10169-103B7 60 years, female 266.9
FF:10153-102I9 76 years, female 130.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 89.4
Pig sample Sample description nTPM
Subiculum
nTPM: 49.4
Samples: 4

Max nTPM: 59.5
Min nTPM: 45.4
Sample A Female 59.5
Sample B Female 45.4
Sample C Male 46.5
Sample D Male 46.0
Dorsal hippocampus
nTPM: 89.4
Samples: 4

Max nTPM: 118.5
Min nTPM: 59.9
Sample A Female 118.5
Sample B Female 92.5
Sample C Male 59.9
Sample D Male 86.7
Entorhinal cortex
nTPM: 46.5
Samples: 4

Max nTPM: 52.0
Min nTPM: 39.8
Sample A Female 52.0
Sample B Female 48.1
Sample C Male 46.0
Sample D Male 39.8
Ventral hippocampus
nTPM: 69.3
Samples: 4

Max nTPM: 103.0
Min nTPM: 47.1
Sample A Female 70.6
Sample B Female 47.1
Sample C Male 56.5
Sample D Male 103.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 137.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.1
Samples: 4

Max nTPM: 101.3
Min nTPM: 83.6
Sample A Male 87.8
Sample B Male 83.8
Sample C Female 101.3
Sample D Female 83.6
Hippocampal formation
nTPM: 137.6
Samples: 4

Max nTPM: 151.8
Min nTPM: 121.2
Sample A Male 133.8
Sample B Male 143.7
Sample C Female 151.8
Sample D Female 121.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 12.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.1
532610 Antisense, RP_040810_02_E08, Mouse strain C57BL/6J (56 days, male) 12.1

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