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  • SUMMARY

  • TISSUE

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  • RPS6
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1071.5 nTPM
HPA Brain:682.1 nTPM
GTEx:1071.5 nTPM
Pig:66.8 nTPM
Mouse:996.1 nTPM
Allen mouse:10.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

682.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 365.1
1961 Female, age 42, unknown 401.5
2226 Male, age 75, left hemisphere 328.6
Dorsomedial nucleus
nTPM: 455.5
2017 Female, age 42, unknown 501.6
2041 Female, age 72, unknown 465.2
1989 Male, age 62, unknown 399.7
Lateral hypothalamic area
nTPM: 517.0
2412 Male, age 62, unknown 594.9
2228 Male, age 66, unknown 539.4
1791 Male, age 80, right hemisphere 475.4
2271 Male, age 75, both hemispheres 458.4
Mammillary body
nTPM: 571.0
1834 Female, age 42, unknown 673.6
1945 Male, age 80, right hemisphere 621.8
1948 Female, age 72, unknown 600.4
2413 Male, age 66, unknown 480.7
1923 Female, age 72, unknown 478.6
Paraventricular nucleus
nTPM: 672.9
2700 Male, age 62, unknown 672.9
Preoptic area
nTPM: 492.4
1861 Female, age 42, unknown 563.1
2414 Female, age 72, unknown 540.4
1907 Male, age 80, right hemisphere 373.6
Supraoptic nucleus
nTPM: 682.1
2043 Male, age 62, unknown 723.7
1894 Female, age 72, unknown 699.8
2835 Female, age 72, unknown 622.8
Ventromedial nucleus
nTPM: 445.1
1982 Female, age 72, unknown 455.6
1822 Female, age 42, unknown 434.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1071.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1071.5
Samples: 257

Max nTPM: 5004.8
Min nTPM: 471.5
Std nTPM: 534.0
Median nTPM: 926.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 5004.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 3334.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 3058.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2931.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 2810.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2749.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2742.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2551.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 2527.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 2277.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 2245.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 2085.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 2072.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1993.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1990.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1908.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1905.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1893.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1857.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1845.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1805.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1770.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1716.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1714.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1660.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1655.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1637.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1599.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1585.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1553.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 1512.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1496.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1472.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1465.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1458.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1452.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1442.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1428.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 1418.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1418.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1417.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1411.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1409.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1386.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1370.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 1369.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1366.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1343.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 1343.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1304.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1291.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1288.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1287.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1279.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1275.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1262.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1248.6
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1236.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1233.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1227.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1221.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1203.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 1201.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1199.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 1198.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1194.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 1193.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 1190.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1185.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 1180.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1172.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1160.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 1152.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1149.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1135.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1126.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1125.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1118.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1118.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 1117.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1112.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 1112.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1109.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 1105.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1098.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 1095.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 1089.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1088.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1080.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1075.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1063.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1060.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 1057.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 1053.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1051.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1033.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 1032.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1029.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1024.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1021.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1019.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1019.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 1010.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 1009.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1008.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1005.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 987.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 985.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 983.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 981.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 980.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 975.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 974.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 971.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 970.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 964.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 963.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 959.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 955.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 953.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 950.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 948.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 943.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 941.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 939.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 938.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 934.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 926.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 926.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 922.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 920.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 919.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 916.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 915.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 913.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 909.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 904.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 897.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 896.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 890.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 890.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 888.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 888.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 881.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 881.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 880.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 876.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 868.9
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 868.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 867.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 865.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 865.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 861.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 859.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 859.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 858.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 852.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 845.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 841.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 837.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 831.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 828.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 828.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 827.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 827.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 822.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 820.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 816.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 816.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 812.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 811.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 809.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 808.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 804.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 803.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 802.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 802.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 801.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 798.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 796.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 795.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 792.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 787.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 787.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 787.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 783.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 783.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 776.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 772.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 772.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 770.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 769.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 761.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 756.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 752.3
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 750.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 749.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 748.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 739.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 738.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 732.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 732.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 731.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 730.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 729.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 726.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 726.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 724.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 723.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 718.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 713.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 709.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 709.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 707.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 706.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 702.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 687.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 687.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 683.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 681.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 678.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 675.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 674.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 673.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 668.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 651.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 646.1
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 639.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 634.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 625.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 620.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 620.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 618.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 614.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 611.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 605.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 599.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 598.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 597.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 597.5
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 595.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 591.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 576.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 573.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 564.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 562.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 562.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 556.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 549.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 539.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 533.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 523.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 521.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 518.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 491.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 483.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 471.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 66.8
Samples: 4

Max nTPM: 85.2
Min nTPM: 51.2
Sample A Female 85.2
Sample B Female 65.0
Sample C Male 65.8
Sample D Male 51.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

996.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 996.2
Samples: 4

Max nTPM: 1117.7
Min nTPM: 931.2
Sample A Male 950.5
Sample B Male 1117.7
Sample C Female 985.2
Sample D Female 931.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 10.4
69873301 Antisense, RP_050512_01_A01, Mouse strain C57BL/6J (56 days, male) 10.4

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