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  • SUMMARY

  • TISSUE

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  • RPS2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:547.5 nTPM
HPA Brain:474.3 nTPM
GTEx:547.5 nTPM
Mouse:473.8 nTPM
Allen mouse:21.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

474.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 396.5
1961 Female, age 42, unknown 426.9
2226 Male, age 75, left hemisphere 366.0
Dorsomedial nucleus
nTPM: 356.2
2017 Female, age 42, unknown 384.2
2041 Female, age 72, unknown 377.0
1989 Male, age 62, unknown 307.4
Lateral hypothalamic area
nTPM: 417.2
1791 Male, age 80, right hemisphere 441.2
2412 Male, age 62, unknown 432.3
2271 Male, age 75, both hemispheres 419.7
2228 Male, age 66, unknown 375.3
Mammillary body
nTPM: 396.3
1834 Female, age 42, unknown 438.9
2413 Male, age 66, unknown 391.7
1923 Female, age 72, unknown 385.3
1945 Male, age 80, right hemisphere 384.3
1948 Female, age 72, unknown 381.3
Paraventricular nucleus
nTPM: 420.2
2700 Male, age 62, unknown 420.2
Preoptic area
nTPM: 359.0
1861 Female, age 42, unknown 399.6
2414 Female, age 72, unknown 365.2
1907 Male, age 80, right hemisphere 312.1
Supraoptic nucleus
nTPM: 474.3
2835 Female, age 72, unknown 498.2
2043 Male, age 62, unknown 480.0
1894 Female, age 72, unknown 444.7
Ventromedial nucleus
nTPM: 444.4
1982 Female, age 72, unknown 463.4
1822 Female, age 42, unknown 425.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

547.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 547.5
Samples: 257

Max nTPM: 1840.8
Min nTPM: 196.4
Std nTPM: 203.8
Median nTPM: 497.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1840.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1714.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1282.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1186.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1114.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1031.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 989.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 961.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 959.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 955.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 923.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 920.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 914.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 904.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 889.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 884.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 869.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 860.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 850.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 839.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 806.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 804.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 801.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 791.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 785.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 785.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 766.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 763.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 750.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 746.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 744.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 738.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 726.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 719.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 716.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 708.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 705.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 705.9
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 704.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 703.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 702.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 697.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 696.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 691.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 690.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 685.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 683.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 682.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 681.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 676.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 675.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 673.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 670.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 669.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 668.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 665.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 655.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 655.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 653.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 653.4
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 652.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 650.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 640.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 638.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 636.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 635.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 633.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 632.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 628.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 626.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 620.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 620.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 615.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 611.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 611.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 606.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 603.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 599.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 599.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 597.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 597.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 594.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 593.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 589.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 588.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 587.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 583.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 582.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 578.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 576.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 575.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 573.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 572.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 568.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 561.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 560.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 559.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 557.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 555.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 554.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 553.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 551.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 550.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 549.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 548.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 546.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 545.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 540.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 539.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 535.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 534.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 530.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 529.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 527.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 524.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 522.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 515.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 507.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 507.1
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 505.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 505.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 504.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 504.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 503.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 500.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 499.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 498.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 497.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 497.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 496.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 495.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 494.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 494.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 493.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 491.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 490.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 489.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 485.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 483.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 481.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 481.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 480.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 479.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 479.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 476.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 475.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 475.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 475.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 474.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 474.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 472.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 471.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 469.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 467.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 466.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 466.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 465.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 462.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 459.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 457.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 452.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 450.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 450.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 449.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 448.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 448.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 447.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 447.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 446.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 445.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 444.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 441.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 439.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 439.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 438.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 438.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 437.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 436.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 434.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 430.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 430.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 427.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 427.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 424.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 424.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 424.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 423.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 418.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 416.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 410.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 409.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 409.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 406.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 405.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 404.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 403.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 402.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 400.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 400.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 399.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 398.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 398.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 398.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 397.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 394.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 394.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 393.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 393.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 392.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 392.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 391.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 388.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 387.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 386.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 385.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 384.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 383.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 382.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 380.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 378.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 378.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 376.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 373.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 372.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 371.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 368.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 365.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 363.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 362.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 360.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 357.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 356.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 354.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 351.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 350.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 349.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 347.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 346.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 346.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 345.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 341.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 341.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 336.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 335.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 332.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 319.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 318.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 317.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 310.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 309.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 306.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 303.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 299.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 296.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 272.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 253.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 196.4
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

473.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 473.9
Samples: 4

Max nTPM: 542.2
Min nTPM: 445.0
Sample A Male 445.0
Sample B Male 542.2
Sample C Female 445.0
Sample D Female 463.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.5
100146146 Antisense, RP_110623_01_A03, Mouse strain C57BL/6J (56 days, male) 21.5

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