RPS11
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • RPS11
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN40 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM8 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE13 SKIN4 BONE MARROW & LYMPHOID TISSUES6
Select an organ to show its tissues
AMYGDALA BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CORPUS CALLOSUM DORSAL HIPPOCAMPUS DORSAL SPINAL CORD ENTORHINAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
INSULAR CORTEX MEDULLA OBLONGATA MIDBRAIN MOTOR AND PREFRONTAL CORTEX MOTOR CORTEX OCCIPITAL CORTEX OLFACTORY BULB PERIAQUEDUCTAL GRAY PONS PREFRONTAL CORTEX PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX ENDOMETRIUM FALLOPIAN TUBE OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE ORBITAL ADIPOSE TISSUE PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:704.7 nTPM
GTEx:1666.9 nTPM
FANTOM5:242.7 Scaled Tags Per Million
Pig:239.1 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

704.7
Sample id Sample description nTPM
Putamen
nTPM: 704.7
2482 Female, age 94, left hemisphere 776.2
1937 Female, age 91, right hemisphere 745.7
2647 Male, age 75, left hemisphere 716.2
2466 Female, age 79, unknown 715.2
1838 Male, age 80, right hemisphere 692.2
2489 Female, age 72, unknown 676.6
1829 Male, age 74, unknown 610.5

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1666.9
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1666.9
Samples: 254

Max nTPM: 3672.4
Min nTPM: 932.3
Std nTPM: 463.3
Median nTPM: 1575.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3672.4
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 3670.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3439.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 3144.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2850.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 2829.8
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2794.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2669.0
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 2650.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 2647.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 2634.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2596.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 2561.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 2510.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 2478.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 2463.3
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 2411.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 2390.8
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 2381.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 2350.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 2333.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2327.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2326.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 2322.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 2291.8
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 2285.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2283.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 2274.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2203.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2168.5
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 2165.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 2158.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2155.7
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 2153.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2145.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2140.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 2127.9
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 2117.1
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 2114.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2112.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2110.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2072.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2069.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2065.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 2064.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2032.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 2025.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2015.7
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 2002.4
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1990.1
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1987.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1961.2
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1953.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1952.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1952.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1936.7
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1934.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1932.7
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1932.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1908.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1905.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1900.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1887.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1887.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1865.5
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1863.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1860.2
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1859.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1849.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1834.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1827.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1826.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1821.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1814.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1797.0
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1796.4
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1795.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1795.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1785.7
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1779.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1773.2
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1772.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1766.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1761.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1750.8
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1742.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1739.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1739.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1738.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1737.5
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1735.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1727.7
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1719.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1711.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1710.9
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1708.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1705.9
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1705.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1700.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1698.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1692.1
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1690.0
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1684.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1681.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1679.9
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1675.5
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1672.0
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1668.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1665.5
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1655.7
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 1653.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1652.4
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1649.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1648.9
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1643.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1638.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1631.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1618.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1605.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1605.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1603.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1597.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1596.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1594.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1587.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1584.5
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 1578.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1572.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1571.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 1570.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1569.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1563.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1557.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1557.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1555.7
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 1549.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1546.3
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 1545.2
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1544.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1542.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1538.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1536.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1529.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1528.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1520.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1519.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1518.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1516.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 1515.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1512.4
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 1509.8
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1506.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 1506.0
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1504.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1502.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1502.5
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1500.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1494.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1494.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1491.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1490.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 1488.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1485.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1478.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1477.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1466.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1463.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1461.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1460.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 1429.5
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1428.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1422.5
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 1416.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1415.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1398.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1397.7
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 1396.6
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1396.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1390.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 1389.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1380.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1379.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1378.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1373.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1370.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1365.4
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1351.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 1351.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 1350.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 1338.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 1334.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1329.3
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 1328.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1326.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 1321.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1316.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 1314.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1311.4
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 1309.7
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 1308.1
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1297.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1297.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1293.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1292.7
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 1289.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 1285.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1272.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1265.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 1265.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 1261.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1261.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 1257.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1252.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 1247.3
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 1239.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 1239.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 1234.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 1233.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1217.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 1217.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 1212.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 1201.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1197.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1193.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1191.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1190.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 1182.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 1176.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 1157.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1157.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1139.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 1136.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1136.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1127.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1122.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1110.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 1104.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1089.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1089.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1075.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1072.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1064.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 1052.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1049.8
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 1047.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1047.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 1029.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1006.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1005.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1003.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 992.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 947.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 938.9
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 932.3
Show allShow less

PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

242.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 242.7
FF:10176-103C5 60 years, female 242.7

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.1
Pig sample Sample description nTPM
Putamen
nTPM: 239.1
Samples: 3

Max nTPM: 273.1
Min nTPM: 189.3
Sample B Female 189.3
Sample C Male 273.1
Sample D Male 255.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.