RPL13A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • IMMUNE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
  • METABOLIC
  • ISOFORM
  • EVOLUTIONARY
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • AI IMPLEMENTATIONS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Tissue
Category
Tau score
Tissue
Category
Tau score
Cluster
Reliability
Region
Niche
Category
Brain region
Category
Tau score
Brain domain
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Cell type
Category
Tau score
Cell type group
Category
Tau score
Single cell
Category
Tau score
Single cell
Category
Tau score
Annotation
Annotation
Annotation
Tissue
Cell type
Enrichment
Cluster
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Regulation
Cancer
Regulation
Cancer
Category
Cancer
Category
Tau score
Correlation
Correlation
Cancer
Category
Tau score
Cluster
Variants
Source
PTM
ipTM
Interacting gene (ensg_id)
Type
Number of interactions
Type
Heterodimer
Subsystem
Isoforms
Specificity
Expression
Species
Ortholog
Type
Species
Tissue
Category
Species
Tau score
Data
Category
Data
Species
Category
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • METABOLIC

  • ISOFORM

  • EVOLUTION

  • RPL13A
IMMUNE CELL NK-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cells
Nk-cells
Immune cell methods
NK-CELLS - Expression summary
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA:4709.4 nTPM
Monaco:677.3 nTPM
Schmiedel:953.0 TPM

NK-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

4709.4
HPA sample nTPM
NK-cell
nTPM: 4709.4
Samples: 6

Max nTPM: 5638.6
Min nTPM: 3566.8
P10809_1013 3747.7
P10809_1033 5269.9
P10809_1052 4726.1
P10809_1071 5638.6
P10809_1093 3566.8
P10809_1103 5307.3

NK-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

677.3
Monaco sample nTPM
NK-cell
nTPM: 677.3
Samples: 4

Max nTPM: 898.0
Min nTPM: 472.0
RHH5316_R3683 898.0
RHH5224_R3596 623.2
RHH5253_R3625 472.0
RHH5282_R3654 715.8

NK-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max subtype TPMi

Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.

953.0
Schmiedel sample id TPM
NK-cell
TPM: 953.0
Samples: 90

Max TPM: 1596.2
Min TPM: 575.6
NK_1 1596.2
NK_2 1312.2
NK_3 1307.0
NK_4 1286.6
NK_5 1280.3
NK_6 1260.8
NK_7 1255.9
NK_8 1243.9
NK_9 1243.1
NK_10 1228.7
NK_11 1223.9
NK_12 1206.3
NK_13 1187.4
NK_14 1186.0
NK_15 1179.9
NK_16 1175.6
NK_17 1168.4
NK_18 1164.7
NK_19 1161.5
NK_20 1122.8
NK_21 1120.4
NK_22 1119.2
NK_23 1118.8
NK_24 1094.7
NK_25 1066.3
NK_26 1060.5
NK_27 1052.6
NK_28 1050.0
NK_29 1045.6
NK_30 1030.2
NK_31 1014.4
NK_32 1013.3
NK_33 1011.4
NK_34 1003.3
NK_35 1003.0
NK_36 999.0
NK_37 995.8
NK_38 991.9
NK_39 985.6
NK_40 961.7
NK_41 940.8
NK_42 934.4
NK_43 922.9
NK_44 913.5
NK_45 910.7
NK_46 910.3
NK_47 908.2
NK_48 907.9
NK_49 899.2
NK_50 898.8
NK_51 897.1
NK_52 896.1
NK_53 894.4
NK_54 893.3
NK_55 884.1
NK_56 882.9
NK_57 882.9
NK_58 878.6
NK_59 869.0
NK_60 864.5
NK_61 855.5
NK_62 850.4
NK_63 847.6
NK_64 842.6
NK_65 827.4
NK_66 820.9
NK_67 792.9
NK_68 785.1
NK_69 778.5
NK_70 778.1
NK_71 773.6
NK_72 768.3
NK_73 766.3
NK_74 753.2
NK_75 751.7
NK_76 743.3
NK_77 738.2
NK_78 726.7
NK_79 720.0
NK_80 710.3
NK_81 706.0
NK_82 699.1
NK_83 695.9
NK_84 692.0
NK_85 675.7
NK_86 667.3
NK_87 654.4
NK_88 635.5
NK_89 621.1
NK_90 575.6
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut and Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.