HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1305.6 nTPM
HPA Brain:815.9 nTPM
GTEx:1305.6 nTPM
FANTOM5:1276.0 Scaled Tags Per Million
Pig:1506.1 nTPM
Mouse:3247.6 nTPM
Allen mouse:19.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044999Antibody CAB007790
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 815.9
Sample id Sample description nTPM
Hippocampus
nTPM: 707.2
1898 Male, age 80, left hemisphere 982.2
1911 Female, age 85, right hemisphere 743.0
1855 Male, age 76, left hemisphere 670.7
2621 Female, age 67, right hemisphere 653.0
2529 Female, age 94, left hemisphere 634.6
2148 Female, age 91, left hemisphere 559.4
Dentate gyrus
nTPM: 658.5
1927 Female, age 91, both hemispheres 812.5
2530 Female, age 94, left hemisphere 750.2
2010 Male, age 76, both hemispheres 733.5
2246 Female, age 85, both hemispheres 632.4
2528 Male, age 74, both hemispheres 564.0
2531 Female, age 67, both hemispheres 458.6
Entorhinal gyrus
nTPM: 654.6
1938 Female, age 85, left hemisphere 903.4
2764 Male, age 80, right hemisphere 690.5
1787 Male, age 76, left hemisphere 672.8
2117 Female, age 91, right hemisphere 594.0
2613 Female, age 94, left hemisphere 567.8
2686 Male, age 75, right hemisphere 498.9
Hippocampus, CA1
nTPM: 815.9
2749 Male, age 80, left hemisphere 1445.1
1873 Female, age 85, both hemispheres 819.6
2527 Male, age 74, both hemispheres 671.6
2045 Male, age 76, both hemispheres 595.8
2082 Female, age 91, right hemisphere 547.4
Hippocampus, CA2
nTPM: 751.8
1963 Male, age 80, left hemisphere 945.8
1892 Male, age 76, both hemispheres 941.8
2249 Male, age 74, both hemispheres 784.1
1940 Female, age 85, left hemisphere 726.5
2113 Female, age 91, right hemisphere 570.5
2437 Female, age 94, left hemisphere 541.9
Hippocampus, CA3
nTPM: 713.2
2137 Male, age 80, left hemisphere 1191.4
1867 Male, age 76, both hemispheres 832.6
1891 Female, age 85, both hemispheres 745.9
2436 Male, age 74, both hemispheres 621.5
2620 Female, age 94, left hemisphere 479.0
2861 Female, age 67, both hemispheres 408.9
Parahippocampal cortex
nTPM: 674.0
1850 Male, age 80, both hemispheres 984.5
1933 Female, age 85, both hemispheres 794.3
1990 Female, age 91, right hemisphere 752.4
2245 Female, age 91, both hemispheres 702.4
2250 Female, age 67, right hemisphere 641.7
2532 Female, age 72, left hemisphere 628.8
2018 Male, age 76, both hemispheres 618.0
2693 Female, age 94, both hemispheres 607.5
2692 Male, age 74, both hemispheres 560.6
2622 Female, age 67, right hemisphere 449.6
Perirhinal gyrus
nTPM: 803.7
1841 Female, age 85, right hemisphere 932.4
1847 Female, age 91, left hemisphere 923.9
1794 Male, age 80, right hemisphere 802.2
2521 Female, age 94, right hemisphere 704.2
2848 Male, age 76, right hemisphere 655.7
Subiculum
nTPM: 665.2
1901 Male, age 80, both hemispheres 935.5
2042 Male, age 76, both hemispheres 733.8
1977 Female, age 85, both hemispheres 714.6
2438 Female, age 94, left hemisphere 592.2
2619 Male, age 74, both hemispheres 550.6
2729 Female, age 91, right hemisphere 464.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1305.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1305.6
Samples: 255

Max nTPM: 3276.7
Min nTPM: 331.3
Std nTPM: 398.9
Median nTPM: 1249.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3276.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 3110.9
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 2682.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2339.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2221.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2194.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2180.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 2070.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 2060.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 2055.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 2019.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1276.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1276.0
FF:10169-103B7 60 years, female 1556.8
FF:10153-102I9 76 years, female 995.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 1506.1
Pig sample Sample description nTPM
Subiculum
nTPM: 1002.8
Samples: 4

Max nTPM: 1283.1
Min nTPM: 866.9
Sample A Female 1283.1
Sample B Female 905.6
Sample C Male 866.9
Sample D Male 955.4
Dorsal hippocampus
nTPM: 1506.1
Samples: 4

Max nTPM: 2043.7
Min nTPM: 992.7
Sample A Female 2043.7
Sample B Female 1512.2
Sample C Male 1475.9
Sample D Male 992.7
Entorhinal cortex
nTPM: 1439.2
Samples: 4

Max nTPM: 1964.6
Min nTPM: 1129.6
Sample A Female 1435.5
Sample B Female 1964.6
Sample C Male 1227.0
Sample D Male 1129.6
Ventral hippocampus
nTPM: 1165.8
Samples: 4

Max nTPM: 1506.5
Min nTPM: 870.1
Sample A Female 1320.4
Sample B Female 870.1
Sample C Male 966.1
Sample D Male 1506.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 3247.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2930.7
Samples: 4

Max nTPM: 3144.8
Min nTPM: 2802.5
Sample A Male 2802.5
Sample B Male 3144.8
Sample C Female 2969.0
Sample D Female 2806.6
Hippocampal formation
nTPM: 3247.6
Samples: 4

Max nTPM: 3696.8
Min nTPM: 2796.7
Sample A Male 3696.8
Sample B Male 3230.4
Sample C Female 3266.6
Sample D Female 2796.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.9
183 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 19.9
182 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 19.1

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