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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1070.8 nTPM
HPA Brain:805.1 nTPM
GTEx:1070.8 nTPM
Pig:742.0 nTPM
Mouse:1700.0 nTPM
Allen mouse:16.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

805.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 621.6
2226 Male, age 75, left hemisphere 783.5
1961 Female, age 42, unknown 459.6
Dorsomedial nucleus
nTPM: 594.7
1989 Male, age 62, unknown 750.6
2041 Female, age 72, unknown 574.8
2017 Female, age 42, unknown 458.7
Lateral hypothalamic area
nTPM: 805.1
2271 Male, age 75, both hemispheres 956.1
2228 Male, age 66, unknown 939.2
1791 Male, age 80, right hemisphere 815.0
2412 Male, age 62, unknown 510.2
Mammillary body
nTPM: 757.7
1923 Female, age 72, unknown 1009.1
2413 Male, age 66, unknown 762.4
1948 Female, age 72, unknown 713.6
1945 Male, age 80, right hemisphere 707.0
1834 Female, age 42, unknown 596.6
Paraventricular nucleus
nTPM: 607.7
2700 Male, age 62, unknown 607.7
Preoptic area
nTPM: 628.2
1907 Male, age 80, right hemisphere 696.9
2414 Female, age 72, unknown 617.1
1861 Female, age 42, unknown 570.5
Supraoptic nucleus
nTPM: 693.6
1894 Female, age 72, unknown 851.0
2043 Male, age 62, unknown 695.4
2835 Female, age 72, unknown 534.5
Ventromedial nucleus
nTPM: 586.1
1982 Female, age 72, unknown 624.0
1822 Female, age 42, unknown 548.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1070.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 1070.8
Samples: 257

Max nTPM: 2299.4
Min nTPM: 190.6
Std nTPM: 307.7
Median nTPM: 1074.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2299.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 2101.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 2051.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 2029.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 1860.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1780.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 1776.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 1741.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1738.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 1699.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 1668.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1630.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1589.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1586.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1540.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1532.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1511.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1491.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1472.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 1463.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 1451.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 1441.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1441.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1440.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1418.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1399.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1395.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 1392.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1382.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 1381.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1376.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1362.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1342.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1339.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1338.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1335.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1333.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 1330.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1325.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 1323.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1320.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1314.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 1312.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 1292.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1288.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 1275.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1274.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 1270.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 1264.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 1263.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 1259.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 1258.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1257.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1256.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1251.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 1249.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 1248.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 1248.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1245.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 1241.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1240.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 1231.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 1227.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 1221.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 1220.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 1219.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 1215.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1211.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1209.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 1206.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 1201.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 1199.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 1197.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1195.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1195.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 1195.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 1191.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1188.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 1187.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 1185.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1184.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 1183.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1181.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1181.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1177.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1173.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 1172.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 1171.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 1164.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 1162.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1150.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 1149.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 1140.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1140.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 1137.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 1135.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1135.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 1134.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 1131.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1129.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 1128.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 1127.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 1126.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 1124.8
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 1124.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 1122.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1122.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1121.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 1118.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1116.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 1114.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 1114.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 1110.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 1106.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 1103.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 1102.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1098.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1095.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 1093.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 1093.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 1092.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 1091.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1089.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 1080.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 1079.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 1078.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1078.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 1075.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 1074.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 1066.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1063.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 1061.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 1061.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 1060.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 1060.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1042.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 1041.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 1041.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 1039.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1033.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 1030.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 1030.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 1027.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1024.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 1021.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 1020.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 1017.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 1014.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 1011.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 1005.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1004.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 1003.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 999.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 997.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 994.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 993.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 993.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 991.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 989.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 986.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 986.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 984.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 983.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 982.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 982.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 975.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 975.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 975.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 974.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 971.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 966.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 964.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 963.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 963.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 955.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 954.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 952.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 944.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 943.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 938.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 937.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 936.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 934.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 934.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 932.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 931.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 929.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 924.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 918.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 916.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 914.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 914.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 913.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 913.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 909.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 908.7
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 903.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 902.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 901.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 897.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 896.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 896.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 883.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 881.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 881.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 868.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 867.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 866.0
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 865.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 864.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 856.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 850.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 845.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 843.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 833.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 831.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 831.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 827.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 820.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 816.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 808.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 802.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 802.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 796.3
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 780.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 769.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 769.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 768.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 752.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 742.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 726.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 720.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 715.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 709.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 684.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 678.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 657.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 645.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 644.7
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 617.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 608.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 568.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 544.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 515.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 495.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 493.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 475.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 444.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 422.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 414.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 381.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 381.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 358.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 333.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 308.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 305.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 190.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

742.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 742.0
Samples: 4

Max nTPM: 1053.7
Min nTPM: 537.2
Sample A Female 1053.7
Sample B Female 770.3
Sample C Male 606.6
Sample D Male 537.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1700.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 1700.0
Samples: 4

Max nTPM: 1830.2
Min nTPM: 1600.6
Sample A Male 1637.4
Sample B Male 1830.2
Sample C Female 1731.9
Sample D Female 1600.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.4
182 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 16.4
183 Antisense, RP_Baylor_102653, Mouse strain C57BL/6J (56 days, male) 15.2

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