A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
667.2
nTPM
Monaco:
33.7
nTPM
Schmiedel:
246.4
TPM
NK-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
667.2
HPA sample
nTPM
NK-cell nTPM: 667.2
Samples: 6
Max nTPM: 832.5
Min nTPM: 271.0
P10809_1013
639.6
P10809_1033
743.7
P10809_1052
832.5
P10809_1071
687.2
P10809_1093
271.0
P10809_1103
829.0
NK-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
33.7
Monaco sample
nTPM
NK-cell nTPM: 33.8
Samples: 4
Max nTPM: 46.5
Min nTPM: 22.9
RHH5316_R3683
37.8
RHH5224_R3596
22.9
RHH5253_R3625
46.5
RHH5282_R3654
27.8
NK-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
Max subtype TPMi
Max subtype nTPM is the value for the subtype that has the largest average nTPM across subtype samples.
246.4
Schmiedel sample id
TPM
NK-cell TPM: 246.4
Samples: 90
Max TPM: 381.1
Min TPM: 152.7
NK_1
381.1
NK_2
331.2
NK_3
328.0
NK_4
311.7
NK_5
303.8
NK_6
300.6
NK_7
300.1
NK_8
298.2
NK_9
295.0
NK_10
293.5
NK_11
291.4
NK_12
288.0
NK_13
285.8
NK_14
285.7
NK_15
284.4
NK_16
284.4
NK_17
282.5
NK_18
282.2
NK_19
280.1
NK_20
280.1
NK_21
275.3
NK_22
275.2
NK_23
274.1
NK_24
271.4
NK_25
270.4
NK_26
269.0
NK_27
265.1
NK_28
263.7
NK_29
263.5
NK_30
261.0
NK_31
260.7
NK_32
259.9
NK_33
259.9
NK_34
259.6
NK_35
258.1
NK_36
257.8
NK_37
257.7
NK_38
256.1
NK_39
253.3
NK_40
250.9
NK_41
250.1
NK_42
250.0
NK_43
249.6
NK_44
248.4
NK_45
248.0
NK_46
247.6
NK_47
246.3
NK_48
245.0
NK_49
245.0
NK_50
243.9
NK_51
243.5
NK_52
242.7
NK_53
242.2
NK_54
242.2
NK_55
242.2
NK_56
240.5
NK_57
238.9
NK_58
238.9
NK_59
237.0
NK_60
236.7
NK_61
236.6
NK_62
235.2
NK_63
231.6
NK_64
231.1
NK_65
221.5
NK_66
221.4
NK_67
220.5
NK_68
217.3
NK_69
211.6
NK_70
210.3
NK_71
210.1
NK_72
207.9
NK_73
206.2
NK_74
204.4
NK_75
204.4
NK_76
200.2
NK_77
195.4
NK_78
194.8
NK_79
194.8
NK_80
193.7
NK_81
191.9
NK_82
191.8
NK_83
190.8
NK_84
185.5
NK_85
184.0
NK_86
178.2
NK_87
176.2
NK_88
175.7
NK_89
175.1
NK_90
152.7
Show allShow less
We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.