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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:3911.5 nTPM
HPA:3911.5 nTPM
GTEx:3831.5 nTPM
FANTOM5:2.6 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA058373
Ovarian stroma cells Low



OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3911.5
overview
Female, age 64
Ovary sample 192
nTPM: 3279.8
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 5119.3
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 4277.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 3317.9
N/A
Female, age 16
Ovary sample 3663
nTPM: 5261.7
N/A
Female, age 20
Ovary sample 3664
nTPM: 3595.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 2528.4

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3831.5
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 3831.5
Samples: 193

Max nTPM: 8939.6
Min nTPM: 1500.7
Std nTPM: 1338.2
Median nTPM: 3493.9
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 8939.6
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 8190.8
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 7622.6
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 7490.4
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 7345.9
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 7119.3
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 7002.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 6861.0
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6696.5
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 6656.2
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 6417.6
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 6321.5
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 6122.3
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 6068.4
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 5885.8
GTEX-183WM-1926-SM-72D5F 70-79 years, female 5875.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 5827.6
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 5768.3
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 5729.8
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 5659.2
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 5480.2
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 5433.0
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 5419.3
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 5370.3
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 5339.8
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 5268.7
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 5206.4
GTEX-QVJO-3126-SM-COH22 60-69 years, female 5135.2
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 5125.6
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 5106.3
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 5070.2
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 4999.8
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 4996.7
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 4990.3
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 4954.1
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 4920.5
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 4916.6
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 4912.7
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 4898.6
GTEX-RU72-2226-SM-46MUE 50-59 years, female 4846.1
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 4839.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 4818.5
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 4750.3
GTEX-15EOM-1526-SM-68723 20-29 years, female 4719.3
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 4684.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 4654.9
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 4650.4
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 4623.4
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 4619.2
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 4596.5
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 4589.3
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 4563.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 4552.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 4491.9
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 4490.3
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 4472.0
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 4461.9
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 4358.3
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 4330.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 4285.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 4212.8
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 4201.9
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 4152.2
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 4130.6
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 4127.7
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 4082.8
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 4017.9
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 3999.7
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 3947.1
GTEX-R45C-2526-SM-GRR28 60-69 years, female 3943.2
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 3911.3
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 3904.3
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 3899.3
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 3856.1
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 3844.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 3844.3
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 3828.3
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 3800.8
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 3784.1
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 3741.3
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 3737.4
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 3725.3
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 3719.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 3690.9
GTEX-11I78-1926-SM-59878 50-59 years, female 3687.2
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 3685.4
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 3677.7
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 3638.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 3624.9
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 3623.2
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 3617.6
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 3607.4
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 3604.6
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 3593.4
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3546.2
GTEX-14PKV-1226-SM-6871T 20-29 years, female 3512.9
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3493.9
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 3482.0
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 3481.7
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 3450.1
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 3437.8
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 3437.8
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 3403.9
GTEX-S32W-1226-SM-4AD67 50-59 years, female 3403.0
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 3397.3
GTEX-18D9A-0826-SM-718C1 30-39 years, female 3391.9
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 3390.3
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 3389.2
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 3376.6
GTEX-P78B-1926-SM-3P616 40-49 years, female 3358.2
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3357.0
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 3354.8
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 3333.5
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3318.8
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 3310.6
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 3308.9
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3300.6
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3297.3
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 3287.2
GTEX-145ME-1226-SM-5MR87 40-49 years, female 3280.3
GTEX-S341-0726-SM-4AD5R 40-49 years, female 3249.3
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 3242.2
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 3228.1
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3223.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 3183.5
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 3174.4
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3170.3
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 3165.5
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 3152.1
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 3130.4
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 3112.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3105.4
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 3104.8
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 3101.8
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3099.5
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 3098.4
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 3074.9
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 3058.1
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 3038.8
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 2983.6
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2961.4
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 2948.9
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 2943.2
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 2938.3
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 2924.0
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2914.1
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 2907.5
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 2906.7
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2885.6
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 2857.1
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 2836.4
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2833.3
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 2812.8
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 2809.6
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 2760.2
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 2756.6
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 2751.3
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 2731.6
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2687.7
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2638.9
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 2634.7
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2571.3
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 2554.0
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 2553.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2537.6
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2513.1
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2491.9
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2443.4
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2413.9
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2375.4
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2371.6
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2363.9
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2354.0
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2329.1
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2327.4
GTEX-14JG6-0626-SM-68716 30-39 years, female 2326.4
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2324.3
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2318.3
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 2309.0
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 2276.2
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 2271.1
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2257.7
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2203.5
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2130.1
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2123.8
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2076.4
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2060.0
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 1905.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1796.9
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1787.5
GTEX-R55G-1526-SM-48FER 40-49 years, female 1771.2
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1597.5
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1500.7
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 2.6
FF:10020-101D2 47,75,84 years, female 2.6

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