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RPL7
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  • RPL7
TISSUE PRIMARY DATA URINARY BLADDER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Urinary bladder
Tissue proteome
Tissue methods
URINARY BLADDER - Expression summary
Protein expression
Urinary bladderi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Urothelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1980.8 nTPM
HPA:1677.2 nTPM
GTEx:1980.8 nTPM
FANTOM5:3.2 Scaled Tags Per Million
URINARY BLADDER - SINGLE CELL RNA EXPRESSION
Explore single cell type data

URINARY BLADDER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA058373
Urothelial cells Medium



URINARY BLADDER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1677.2
overview
Male, age 74
Urinary bladder sample 264
nTPM: 1152.3
Cell types%
Urothelial cells:
5

Smooth muscle cells:
60

Fibroblasts:
20

Endothelial cells:
10

Other cell types:
5

overview
Male, age 80
Urinary bladder sample 265
nTPM: 1620.8
Cell types%
Urothelial cells:
10

Smooth muscle cells:
45

Fibroblasts:
15

Endothelial cells:
10

Other cell types:
20

N/A
Female, age 0.1
Urinary bladder sample 1597
nTPM: 1959
N/A
Female, age 0.1
Urinary bladder sample 1598
nTPM: 1976.8

URINARY BLADDER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1980.8
GTEx sample id Sample description nTPM
Bladder
Average nTPM: 1980.8
Samples: 77

Max nTPM: 3541.7
Min nTPM: 1214.2
Std nTPM: 416.4
Median nTPM: 1967.8
GTEX-NPJ8-1126-SM-GNTAI 40-49 years, male 3541.7
GTEX-T5JC-1126-SM-GPIA1 20-29 years, male 3132.2
GTEX-R45C-2426-SM-HL11G 60-69 years, female 2690.0
GTEX-P44H-2226-SM-E9U4P 40-49 years, male 2669.4
GTEX-QDT8-2826-SM-GOQYY 30-39 years, female 2657.8
GTEX-Q734-1226-SM-GRR21 40-49 years, female 2567.7
GTEX-OHPK-1926-SM-H7OF2 50-59 years, female 2502.7
GTEX-S4P3-0826-SM-H7OF3 50-59 years, female 2496.8
GTEX-OOBJ-1926-SM-GRR1P 60-69 years, male 2386.0
GTEX-QDVJ-1526-SM-GPI84 50-59 years, male 2379.0
GTEX-QDVN-1426-SM-GPRWL 50-59 years, male 2350.6
GTEX-QEL4-1826-SM-EZ6KU 50-59 years, male 2348.5
GTEX-PLZ6-1026-SM-GQ1C8 30-39 years, male 2343.5
GTEX-QV31-0926-SM-GQ1C6 30-39 years, male 2321.8
GTEX-R55C-1226-SM-GOQY7 40-49 years, male 2318.6
GTEX-P78B-2126-SM-GQ1C3 40-49 years, female 2300.5
GTEX-OXRK-1926-SM-GRR1N 50-59 years, female 2274.8
GTEX-REY6-2026-SM-GPRYL 60-69 years, male 2267.9
GTEX-T6MO-0926-SM-GPRWN 40-49 years, female 2256.8
GTEX-Q2AH-1326-SM-GPRWF 40-49 years, male 2252.9
GTEX-P4QS-1926-SM-GQ1BY 60-69 years, male 2207.7
GTEX-OIZF-1926-SM-7PBZS 60-69 years, male 2193.7
GTEX-RN64-2426-SM-EZ6L2 50-59 years, male 2192.4
GTEX-RWS6-1426-SM-GPRWQ 60-69 years, female 2190.2
GTEX-T2IS-2526-SM-GRR23 20-29 years, female 2158.5
GTEX-T8EM-1726-SM-GPRWO 40-49 years, male 2144.6
GTEX-N7MT-1826-SM-GQ1C9 60-69 years, female 2130.8
GTEX-QEG5-2326-SM-GRR2Z 20-29 years, male 2096.6
GTEX-P4PQ-1926-SM-GRR14 60-69 years, male 2095.0
GTEX-PLZ5-1326-SM-GQ1C2 50-59 years, male 2081.5
GTEX-TKQ2-0526-SM-GRR15 50-59 years, male 2047.5
GTEX-N7MS-2126-SM-GRR2X 60-69 years, male 2035.1
GTEX-QMRM-1326-SM-HAUYS 50-59 years, male 2007.5
GTEX-SUCS-1226-SM-GPI9A 70-79 years, male 2003.9
GTEX-PWCY-1126-SM-H7OGX 20-29 years, female 1997.9
GTEX-QLQ7-1226-SM-GOQYE 60-69 years, male 1991.4
GTEX-S32W-1126-SM-4AD5V 50-59 years, female 1984.9
GTEX-SE5C-1026-SM-4BRUG 40-49 years, female 1979.6
GTEX-OHPL-1926-SM-HAV18 60-69 years, female 1967.8
GTEX-OIZH-1926-SM-GPRXO 50-59 years, male 1966.8
GTEX-TMMY-1526-SM-4DXST 40-49 years, female 1964.7
GTEX-T5JW-1026-SM-EZ6LR 20-29 years, female 1955.9
GTEX-P4PP-1926-SM-HAUZM 30-39 years, female 1937.5
GTEX-R55G-1326-SM-HAUYU 40-49 years, female 1911.9
GTEX-RM2N-1026-SM-GOQY8 50-59 years, male 1903.1
GTEX-S95S-0626-SM-EZ6L8 60-69 years, male 1858.5
GTEX-RNOR-2126-SM-EXURR 50-59 years, female 1850.6
GTEX-U3ZM-0826-SM-4DXU6 40-49 years, male 1840.4
GTEX-OIZI-1926-SM-H7OGY 40-49 years, male 1830.7
GTEX-PW2O-1026-SM-GPRWA 20-29 years, male 1812.3
GTEX-QCQG-0826-SM-GPI8H 50-59 years, female 1806.8
GTEX-T6MN-2226-SM-EVYAM 50-59 years, male 1806.7
GTEX-OOBK-1926-SM-HAUZL 40-49 years, male 1772.9
GTEX-PX3G-1926-SM-GQ1ED 20-29 years, female 1745.8
GTEX-S4UY-0926-SM-4AD6O 40-49 years, female 1743.3
GTEX-S3XE-1226-SM-4AD4L 50-59 years, male 1717.6
GTEX-Q2AI-1026-SM-GRR3I 40-49 years, male 1711.7
GTEX-O5YT-1926-SM-H6Q82 20-29 years, male 1649.6
GTEX-OHPM-1926-SM-H7OG1 50-59 years, male 1634.0
GTEX-QXCU-2226-SM-GPI87 50-59 years, male 1633.6
GTEX-S4Q7-0926-SM-4AD5D 20-29 years, male 1622.6
GTEX-S33H-1926-SM-EYYVH 30-39 years, male 1607.0
GTEX-P4QT-1926-SM-HAUYQ 50-59 years, female 1577.1
GTEX-RWSA-2126-SM-H7OG7 40-49 years, male 1574.1
GTEX-QV44-1426-SM-GPI8D 50-59 years, male 1563.3
GTEX-QEG4-2126-SM-GQ1CE 30-39 years, male 1516.6
GTEX-SNOS-0526-SM-4DM54 40-49 years, male 1511.4
GTEX-PWN1-1926-SM-HAUZN 40-49 years, female 1508.1
GTEX-R53T-1426-SM-H7OG3 50-59 years, female 1499.5
GTEX-U4B1-1226-SM-4DXT7 40-49 years, male 1497.8
GTEX-QLQW-0826-SM-H7OG2 30-39 years, male 1446.5
GTEX-S7SF-1126-SM-GQ1CH 20-29 years, female 1434.7
GTEX-U3ZH-0826-SM-H6Q7I 30-39 years, male 1387.8
GTEX-RUSQ-1326-SM-GQ1EA 50-59 years, male 1375.7
GTEX-U3ZN-1226-SM-4DXUD 30-39 years, female 1289.0
GTEX-SNMC-0826-SM-4DM66 20-29 years, male 1277.3
GTEX-POMQ-0926-SM-H6Q6H 20-29 years, female 1214.2
Show allShow less

URINARY BLADDER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Bladder
Scaled Tags Per Million: 3.2
FF:10011-101C2 55,58,79 years, mixed 3.2

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