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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
73.5
nTPM
HPA Brain:
35.7
nTPM
GTEx:
73.5
nTPM
FANTOM5:
96.7
Scaled Tags Per Million
Pig:
24.4
nTPM
Mouse:
70.7
nTPM
Allen mouse:
0.2
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
35.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 27.6
2411
Female, age 72, unknown
32.4
1870
Female, age 42, unknown
31.8
2019
Male, age 18, unknown
31.8
1827
Male, age 72, unknown
28.5
1830
Male, age 51, unknown
27.9
1833
Male, age 53, unknown
27.6
2219
Male, age 76, both hemispheres
26.6
2666
Male, age 74, left hemisphere
24.6
2586
Male, age 75, left hemisphere
23.4
2828
Female, age 72, unknown
21.6
Dorsal raphe nucleus nTPM: 31.5
2298
Female, age 72, unknown
37.6
1828
Male, age 53, unknown
33.5
2750
Male, age 76, both hemispheres
30.9
2047
Male, age 72, unknown
29.3
2016
Female, age 72, unknown
25.9
Inferior colliculus nTPM: 29.4
2097
Female, age 72, unknown
33.5
1890
Male, age 53, unknown
29.0
1848
Female, age 42, unknown
28.9
2849
Male, age 72, unknown
26.4
Median raphe nucleus nTPM: 35.7
2220
Male, age 76, midline
35.7
Periaquaductal grey, anterior nTPM: 29.0
1947
Male, age 18, unknown
33.7
2502
Female, age 75, unknown
28.8
1795
Male, age 51, unknown
24.6
Periaquaductal grey, dorsal nTPM: 25.9
2850
Male, age 76, both hemispheres
29.3
1840
Male, age 53, unknown
27.2
1831
Male, age 72, unknown
23.7
2464
Female, age 72, unknown
23.5
Periaquaductal grey, lateral nTPM: 23.6
2272
Male, age 74, both hemispheres
25.1
2053
Male, age 18, unknown
24.0
2140
Male, age 76, both hemispheres
21.7
Pretectal area nTPM: 30.8
1944
Female, age 72, unknown
37.0
1816
Male, age 51, unknown
36.6
1817
Female, age 42, unknown
35.6
2007
Male, age 72, unknown
35.1
2224
Female, age 72, unknown
33.6
1815
Male, age 53, unknown
33.3
2667
Female, age 75, unknown
33.1
2273
Male, age 74, both hemispheres
26.2
2825
Male, age 18, unknown
25.8
2316
Male, age 76, right hemisphere
23.1
2407
Male, age 75, both hemispheres
19.7
Red nucleus nTPM: 27.9
1821
Female, age 72, unknown
38.4
1954
Female, age 42, unknown
29.9
2823
Male, age 76, right hemisphere
29.4
1865
Male, age 51, unknown
28.5
2725
Female, age 75, unknown
28.2
2227
Male, age 72, unknown
27.5
2785
Male, age 18, unknown
27.5
1904
Male, age 53, unknown
26.6
2769
Male, age 72, unknown
26.6
2503
Female, age 72, unknown
25.8
2588
Male, age 74, left hemisphere
23.3
2584
Male, age 75, left hemisphere
22.5
Substantia nigra nTPM: 34.9
2241
Male, age 72, unknown
42.5
1916
Female, age 42, unknown
42.2
1889
Female, age 72, unknown
39.8
2409
Female, age 72, unknown
39.0
1941
Male, age 53, unknown
36.9
1851
Male, age 51, unknown
34.4
2665
Male, age 74, both hemispheres
33.9
2699
Male, age 18, unknown
31.1
2590
Female, age 75, unknown
28.4
2583
Male, age 75, right hemisphere
21.1
Superior colliculus nTPM: 25.8
1895
Male, age 76, right hemisphere
32.1
2087
Female, age 72, unknown
27.9
2587
Male, age 74, left hemisphere
27.9
2668
Female, age 75, unknown
27.7
1913
Female, age 42, unknown
26.3
1796
Male, age 53, unknown
25.3
1839
Male, age 51, unknown
25.1
2261
Male, age 18, unknown
23.9
1995
Male, age 72, unknown
22.9
2664
Male, age 75, both hemispheres
18.7
Ventral tegmental area nTPM: 31.7
2218
Male, age 76, both hemispheres
34.7
1915
Female, age 42, unknown
34.2
2410
Female, age 72, unknown
34.2
2223
Female, age 72, unknown
32.7
1942
Male, age 51, unknown
29.4
2021
Male, age 53, unknown
24.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
73.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 73.5
Samples: 139
Max nTPM: 121.5
Min nTPM: 33.6
Std nTPM: 15.2
Median nTPM: 72.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
121.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
118.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
115.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
113.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
108.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
104.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
104.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
102.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
99.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
99.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
97.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
95.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
95.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
93.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
92.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
90.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
89.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
89.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
88.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
88.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
87.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
87.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
86.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
86.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
85.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
85.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
85.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
84.1
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
83.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
83.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
82.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
82.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
82.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
81.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
81.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
80.8
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
80.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
80.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
80.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
80.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
79.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
79.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
79.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
79.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
79.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
78.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
78.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
77.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
77.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
77.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
77.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
76.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
76.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
76.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
76.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
76.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
76.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
76.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
76.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
76.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
76.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
75.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
75.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
75.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
74.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
74.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
74.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
73.2
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
73.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
72.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
72.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
71.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
70.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
70.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
70.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
70.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
69.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
69.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
69.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
69.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
69.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
68.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
68.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
68.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
67.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
67.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
67.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
67.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
66.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
66.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
65.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
65.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
65.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
65.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
64.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
64.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
64.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
64.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
63.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
63.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
63.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
63.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
63.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
62.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
62.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
62.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
62.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
61.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
61.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
60.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
59.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
59.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
59.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
59.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
59.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
58.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
58.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
58.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
58.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
57.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
57.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
57.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
56.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
56.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
55.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
55.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
55.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
55.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
54.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
54.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
53.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
53.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
53.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
52.5
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
52.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
50.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
47.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
46.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
33.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
70.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 70.7
Samples: 4
Max nTPM: 75.9
Min nTPM: 62.1
Sample A
Male
75.9
Sample B
Male
68.9
Sample C
Female
62.1
Sample D
Female
75.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.