HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:381.7 nTPM
HPA Brain:136.9 nTPM
GTEx:381.7 nTPM
FANTOM5:186.8 Scaled Tags Per Million
Pig:516.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063339
Glial cells Not detected
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 136.9
Sample id Sample description nTPM
Hippocampus
nTPM: 131.9
2621 Female, age 67, right hemisphere 148.5
1855 Male, age 76, left hemisphere 141.6
2529 Female, age 94, left hemisphere 139.6
1898 Male, age 80, left hemisphere 130.4
1911 Female, age 85, right hemisphere 117.1
2148 Female, age 91, left hemisphere 114.1
Dentate gyrus
nTPM: 135.4
2530 Female, age 94, left hemisphere 164.1
2531 Female, age 67, both hemispheres 146.9
2246 Female, age 85, both hemispheres 138.4
2010 Male, age 76, both hemispheres 135.7
2528 Male, age 74, both hemispheres 121.0
1927 Female, age 91, both hemispheres 106.1
Entorhinal gyrus
nTPM: 130.6
1787 Male, age 76, left hemisphere 137.3
2764 Male, age 80, right hemisphere 135.9
2686 Male, age 75, right hemisphere 135.1
2613 Female, age 94, left hemisphere 126.3
1938 Female, age 85, left hemisphere 125.7
2117 Female, age 91, right hemisphere 123.4
Hippocampus, CA1
nTPM: 119.9
2045 Male, age 76, both hemispheres 137.6
2082 Female, age 91, right hemisphere 128.9
1873 Female, age 85, both hemispheres 116.4
2527 Male, age 74, both hemispheres 114.7
2749 Male, age 80, left hemisphere 102.1
Hippocampus, CA2
nTPM: 121.0
2437 Female, age 94, left hemisphere 134.8
1940 Female, age 85, left hemisphere 122.3
2113 Female, age 91, right hemisphere 120.7
2249 Male, age 74, both hemispheres 116.5
1963 Male, age 80, left hemisphere 115.9
1892 Male, age 76, both hemispheres 115.8
Hippocampus, CA3
nTPM: 121.4
2861 Female, age 67, both hemispheres 140.9
1867 Male, age 76, both hemispheres 130.7
1891 Female, age 85, both hemispheres 129.8
2436 Male, age 74, both hemispheres 126.9
2620 Female, age 94, left hemisphere 109.1
2137 Male, age 80, left hemisphere 91.0
Parahippocampal cortex
nTPM: 123.7
2018 Male, age 76, both hemispheres 158.6
1850 Male, age 80, both hemispheres 136.0
2532 Female, age 72, left hemisphere 134.6
2692 Male, age 74, both hemispheres 123.5
1933 Female, age 85, both hemispheres 122.4
1990 Female, age 91, right hemisphere 122.3
2250 Female, age 67, right hemisphere 120.8
2245 Female, age 91, both hemispheres 116.5
2622 Female, age 67, right hemisphere 110.9
2693 Female, age 94, both hemispheres 91.9
Perirhinal gyrus
nTPM: 126.2
1794 Male, age 80, right hemisphere 129.2
1847 Female, age 91, left hemisphere 127.8
1841 Female, age 85, right hemisphere 127.4
2848 Male, age 76, right hemisphere 125.8
2521 Female, age 94, right hemisphere 120.9
Subiculum
nTPM: 136.9
2438 Female, age 94, left hemisphere 163.0
2042 Male, age 76, both hemispheres 151.6
1977 Female, age 85, both hemispheres 133.7
2619 Male, age 74, both hemispheres 131.6
2729 Female, age 91, right hemisphere 125.0
1901 Male, age 80, both hemispheres 116.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 381.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 381.7
Samples: 255

Max nTPM: 940.3
Min nTPM: 196.9
Std nTPM: 120.1
Median nTPM: 355.8
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 940.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 866.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 844.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 770.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 704.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 648.2
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 647.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 634.5
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 628.9
GTEX-13PLJ-0011-R1a-SM-GJ3QF 60-69 years, female 628.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 627.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 186.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 186.8
FF:10153-102I9 76 years, female 193.0
FF:10169-103B7 60 years, female 180.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 516.0
Pig sample Sample description nTPM
Subiculum
nTPM: 398.8
Samples: 4

Max nTPM: 557.6
Min nTPM: 322.9
Sample A Female 557.6
Sample B Female 378.2
Sample C Male 336.6
Sample D Male 322.9
Dorsal hippocampus
nTPM: 516.0
Samples: 4

Max nTPM: 685.7
Min nTPM: 362.6
Sample A Female 685.7
Sample B Female 453.5
Sample C Male 562.1
Sample D Male 362.6
Entorhinal cortex
nTPM: 371.5
Samples: 4

Max nTPM: 426.0
Min nTPM: 275.6
Sample A Female 364.7
Sample B Female 426.0
Sample C Male 419.8
Sample D Male 275.6
Ventral hippocampus
nTPM: 424.6
Samples: 4

Max nTPM: 514.7
Min nTPM: 335.0
Sample A Female 414.1
Sample B Female 335.0
Sample C Male 514.7
Sample D Male 434.7

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