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  • SUMMARY

  • TISSUE

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  • RPS3
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:354.3 nTPM
HPA Brain:186.1 nTPM
GTEx:354.3 nTPM
Pig:521.0 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 132.8
1961 Female, age 42, unknown 154.6
2226 Male, age 75, left hemisphere 110.9
Dorsomedial nucleus
nTPM: 141.9
2041 Female, age 72, unknown 157.4
2017 Female, age 42, unknown 150.0
1989 Male, age 62, unknown 118.4
Lateral hypothalamic area
nTPM: 165.4
2412 Male, age 62, unknown 203.7
2228 Male, age 66, unknown 166.9
1791 Male, age 80, right hemisphere 151.5
2271 Male, age 75, both hemispheres 139.7
Mammillary body
nTPM: 151.7
1834 Female, age 42, unknown 162.3
1948 Female, age 72, unknown 157.9
1945 Male, age 80, right hemisphere 157.0
2413 Male, age 66, unknown 153.9
1923 Female, age 72, unknown 127.1
Paraventricular nucleus
nTPM: 186.1
2700 Male, age 62, unknown 186.1
Preoptic area
nTPM: 152.5
1861 Female, age 42, unknown 170.6
2414 Female, age 72, unknown 169.8
1907 Male, age 80, right hemisphere 117.2
Supraoptic nucleus
nTPM: 178.2
2835 Female, age 72, unknown 189.0
2043 Male, age 62, unknown 175.5
1894 Female, age 72, unknown 170.1
Ventromedial nucleus
nTPM: 174.3
1982 Female, age 72, unknown 177.3
1822 Female, age 42, unknown 171.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

354.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 354.3
Samples: 257

Max nTPM: 1473.8
Min nTPM: 173.5
Std nTPM: 140.3
Median nTPM: 319.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1473.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 975.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 804.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 776.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 749.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 741.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 735.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 720.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 709.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 704.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 697.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 647.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 611.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 610.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 588.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 566.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 560.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 560.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 560.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 555.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 547.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 541.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 534.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 522.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 521.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 515.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 512.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 502.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 491.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 485.2
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 480.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 480.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 466.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 465.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 465.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 465.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 457.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 452.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 449.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 444.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 437.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 432.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 431.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 431.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 430.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 424.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 424.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 420.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 415.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 411.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 410.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 408.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 408.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 403.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 402.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 401.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 401.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 399.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 397.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 397.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 396.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 396.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 395.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 394.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 394.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 386.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 385.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 384.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 383.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 381.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 381.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 379.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 378.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 378.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 377.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 377.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 377.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 374.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 374.2
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 372.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 372.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 371.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 367.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 367.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 358.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 358.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 354.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 354.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 351.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 347.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 347.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 342.1
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 342.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 340.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 339.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 339.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 338.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 338.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 337.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 336.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 336.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 335.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 335.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 334.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 334.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 334.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 333.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 333.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 332.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 332.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 332.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 331.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 330.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 329.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 329.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 329.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 328.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 328.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 327.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 326.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 324.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 323.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 322.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 322.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 321.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 321.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 320.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 319.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 319.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 319.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 317.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 317.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 316.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 315.0
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 313.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 313.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 313.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 313.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 312.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 312.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 311.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 310.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 310.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 309.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 309.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 308.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 306.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 306.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 306.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 305.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 305.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 305.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 305.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 305.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 304.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 303.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 303.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 303.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 302.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 302.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 301.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 301.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 300.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 300.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 299.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 299.3
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 297.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 296.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 293.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 292.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 291.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 290.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 290.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 289.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 289.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 288.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 288.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 288.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 285.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 285.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 284.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 283.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 283.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 282.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 281.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 281.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 280.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 279.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 279.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 279.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 275.6
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 275.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 274.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 273.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 272.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 272.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 270.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 270.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 268.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 267.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 265.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 265.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 265.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 264.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 264.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 263.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 261.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 261.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 259.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 259.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 258.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 258.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 258.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 255.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 254.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 253.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 251.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 250.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 250.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 249.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 249.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 249.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 249.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 248.2
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 246.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 245.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 244.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 241.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 240.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 240.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 238.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 237.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 236.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 235.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 231.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 229.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 227.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 226.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 225.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 225.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 224.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 222.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 220.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 219.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 218.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 218.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 216.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 214.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 214.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 200.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 197.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 188.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 188.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 185.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 185.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 182.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 173.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

521.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 521.0
Samples: 4

Max nTPM: 728.6
Min nTPM: 322.9
Sample A Female 728.6
Sample B Female 502.1
Sample C Male 530.4
Sample D Male 322.9

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