We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PDCD4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PDCD4
TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:247.6 nTPM
HPA:247.6 nTPM
GTEx:85.6 nTPM
FANTOM5:1391.2 Scaled Tags Per Million

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001032Antibody HPA027214Antibody CAB037024
Glandular cells HighHighHigh







SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.6
overview
Female, age 68
Salivary gland sample 216
nTPM: 176.3
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 414.9
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 151.7
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.6
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 85.6
Samples: 162

Max nTPM: 250.6
Min nTPM: 26.3
Std nTPM: 44.5
Median nTPM: 72.9
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 250.6
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 243.1
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 211.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 210.3
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 205.8
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 192.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 190.6
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 186.1
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 180.3
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 176.4
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 173.8
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 168.3
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 166.7
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 159.3
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 157.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 157.0
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 148.8
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 145.5
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 141.8
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 140.3
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 140.0
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 139.9
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 135.1
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 125.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 125.1
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 123.6
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 123.1
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 120.1
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 119.6
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 118.0
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 115.9
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 113.2
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 111.4
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 110.9
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 110.7
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 109.8
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 109.4
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 109.0
GTEX-15SHV-2226-SM-6M464 60-69 years, male 106.6
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 105.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 104.2
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 104.2
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 102.9
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 101.2
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 100.6
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 99.0
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 97.2
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 97.1
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 96.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 96.9
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 96.9
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 96.2
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 94.0
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 93.6
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 93.1
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 91.2
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 88.5
GTEX-11P82-0926-SM-5986X 20-29 years, male 87.7
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 86.8
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 86.5
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 86.2
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 85.3
GTEX-Y111-2626-SM-4TT24 50-59 years, male 84.5
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 83.3
GTEX-178AV-1426-SM-6LLID 40-49 years, male 82.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 81.2
GTEX-13O21-1926-SM-5MR39 50-59 years, male 80.5
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 80.0
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 79.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 78.8
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 77.7
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 76.9
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 76.6
GTEX-1445S-2926-SM-5O993 60-69 years, male 76.5
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 75.8
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 75.1
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 74.4
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 73.8
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 73.6
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 73.5
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 73.0
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 72.8
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 72.6
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 72.3
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 71.7
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 70.8
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 70.3
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 69.8
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 69.5
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 69.1
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 68.7
GTEX-X261-2426-SM-4PQZU 50-59 years, male 68.4
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 68.1
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 67.6
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 67.5
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 66.8
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 66.8
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 66.2
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 65.5
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 64.3
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 64.1
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 62.0
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 61.7
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 61.3
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 60.8
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 60.0
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 59.9
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 59.8
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 59.6
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 58.9
GTEX-13113-1526-SM-5EGHV 60-69 years, female 58.5
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 58.4
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 58.2
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 58.0
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 56.1
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 56.1
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 55.4
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 55.0
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 54.8
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 54.6
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 54.4
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 54.1
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 53.2
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 53.2
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 53.0
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 52.4
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 52.3
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 52.1
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 52.0
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 50.5
GTEX-1B932-0626-SM-731EM 40-49 years, female 50.1
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 49.5
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 49.2
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 48.1
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 47.0
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 46.8
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 46.5
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 45.4
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 45.4
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 45.2
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 44.1
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 43.6
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 43.6
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 43.4
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 43.0
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 43.0
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 42.4
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 41.9
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 41.9
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 41.0
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 41.0
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 39.9
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 39.8
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 37.9
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 36.5
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 36.0
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 35.4
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 33.8
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 32.4
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 29.3
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 28.9
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 26.3
Show allShow less

SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1391.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1391.2
FF:10199-103F1 23 years, male 1391.2
Salivary gland
Scaled Tags Per Million: 972.6
FF:10093-102C3 16-60 years, mixed 972.6
Submaxillary gland
Scaled Tags Per Million: 785.2
FF:10202-103F4 24 years, male 785.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org