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BETA
  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • IMMUNE

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • EVOLUTION

  • RPL30
EVOLUTIONARY PUTAMEN Show tissue menu
BRAIN74 EYE4 ENDOCRINE TISSUES5 RESPIRATORY SYSTEM6 PROXIMAL DIGESTIVE TRACT5 GASTROINTESTINAL TRACT11 LIVER & GALLBLADDER4 PANCREAS1 KIDNEY & URINARY BLADDER4 MALE REPRODUCTIVE SYSTEM11 BREAST & FEMALE REPRODUCTIVE SYSTEM10 MUSCLE & VASCULAR TISSUE12 CONNECTIVE & SOFT TISSUE15 SKIN4 BONE MARROW & LYMPHOID TISSUES7
Select an organ to show its tissues
AMYGDALA ANGULAR GYRUS ANNECTANT GYRUS ANTERIOR CINGULATE GYRUS BASAL GANGLIA CAUDATE NUCLEUS CAUDATE PUTAMEN CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS CINGULATE CORTEX CLAUSTRUM CORPUS CALLOSUM CUNEUS DORSAL HIPPOCAMPUS DORSAL ROOT GANGLION DORSAL SPINAL CORD ENTORHINAL CORTEX FRONTAL CORTEX
FUSIFORM GYRUS GENICULATE NUCLEUS GLOBUS PALLIDUS GYRUS RECTUS HABENULA HIPPOCAMPAL FORMATION HYPOTHALAMUS HYPOTHALAMUS, ANTERIOR HYPOTHALAMUS, POSTERIOR INFERIOR FRONTAL GYRUS INFERIOR OCCIPITAL GYRUS INFERIOR TEMPORAL GYRUS INSULAR CORTEX LATERAL THALAMIC NUCLEI MEDULLA OBLONGATA MIDBRAIN MIDDLE FRONTAL GYRUS MIDDLE TEMPORAL GYRUS MOTOR AND PREFRONTAL CORTEX
MOTOR CORTEX OCCIPITAL CORTEX OCCIPITAL GYRUS OLFACTORY BULB ORBITAL GYRUS PERIAQUEDUCTAL GRAY PONS POSTCENTRAL GYRUS POSTERIOR CINGULATE CORTEX POSTERIOR PARAHIPPOCAMPAL GYRUS POSTERIOR THALAMUS PRECENTRAL GYRUS PREFRONTAL CORTEX PREOPTIC AREA PUTAMEN RETROSPLENIAL AND CINGULATE CORTEX RETROSPLENIAL CORTEX SEPTAL AREA SEPTUM
SOMATOSENSORY CORTEX SPINAL CORD SUBICULUM SUBSTANTIA NIGRA SUPERIOR COLLICULI SUPERIOR FRONTAL GYRUS SUPERIOR PARIETAL LOBULE SUPERIOR TEMPORAL GYRUS SUPRAMARGINAL GYRUS TEMPORAL CORTEX THALAMUS VENTRAL FOREBRAIN VENTRAL HIPPOCAMPUS VENTRAL PALLIDUM VENTRAL SPINAL CORD VISUAL CORTEX WHITE MATTER
CORNEA HARDERIAN GLAND LENS RETINA
ADRENAL GLAND PARATHYROID GLAND PINEAL GLAND PITUITARY GLAND THYROID GLAND
BRONCHUS LARYNX LUNG NASOPHARYNX OLFACTORY EPITHELIUM TRACHEA
ESOPHAGUS LIP ORAL MUCOSA SALIVARY GLAND TONGUE
CECUM COLON DUODENUM ILEUM JEJUNUM RECTUM SMALL INTESTINE STOMACH STOMACH (LOWER) STOMACH (MIDDLE) STOMACH (UPPER)
GALLBLADDER LIVER LIVER (LOBE 1) LIVER (LOBE 4)
PANCREAS
KIDNEY KIDNEY (CORTEX) KIDNEY (MEDULLA) URINARY BLADDER
BULBOURETHRAL GLAND DUCTUS DEFERENS EPIDIDYMIS MALE PREPUTIAL GLAND PENIS PROSTATE PROSTATE (ANTERIOR) PROSTATE (VENTRAL) SEMINAL VESICLE TESTIS URETHRAL GLAND
BREAST CERVIX CLITORIS ENDOMETRIUM FALLOPIAN TUBE FEMALE PREPUTIAL GLAND OVARY PLACENTA UTERUS VAGINA
AORTA BLOOD VESSEL DIAPHRAGM HEART ATRIUM HEART MUSCLE HEART VALVE HEART WALL PERIPHERAL VASCULATURE SKELETAL MUSCLE SMOOTH MUSCLE SMOOTH MUSCLE (INTESTINE) SMOOTH MUSCLE (UTERUS)
ABDOMINAL ADIPOSE TISSUE ADIPOSE TISSUE BROWN ADIPOSE TISSUE DURA MATER EAR CANAL EAR CARTILAGE JOINT CARTILAGE MENINGES ORBITAL ADIPOSE TISSUE PERICARDIUM PERITONEUM PLEURA SUBCUTANEOUS ADIPOSE TISSUE SYNOVIAL TISSUE VAGUS NERVE
EYE LID SKIN SKIN (BACK) SKIN (GROIN)
APPENDIX BLOOD, PBMC BONE MARROW LYMPH NODE SPLEEN THYMUS TONSIL
HumanMacaqueMouseRatPig
Protein evolution
Brain
Evolutionary methods
PUTAMEN - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

HPA Brain:368.5 nTPM
GTEx:1148.8 nTPM
FANTOM5:370.6 Scaled Tags Per Million
Macaque:287.2 nTPM
Pig:111.9 nTPM

PUTAMEN - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

368.5
Sample id Sample description nTPM
Putamen
nTPM: 368.5
2647 Male, age 75, left hemisphere 404.6
1937 Female, age 91, right hemisphere 401.5
2482 Female, age 94, left hemisphere 391.3
2466 Female, age 79, unknown 371.3
1829 Male, age 74, unknown 357.3
1838 Male, age 80, right hemisphere 347.6
2489 Female, age 72, unknown 305.8

PUTAMEN - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1148.8
GTEx sample id Sample description nTPM
Brain - Putamen (basal ganglia)
Average nTPM: 1148.8
Samples: 254

Max nTPM: 3171.0
Min nTPM: 585.3
Std nTPM: 364.4
Median nTPM: 1060.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3171.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2571.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2498.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2265.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2171.6
GTEX-11ZTS-0011-R7a-SM-GI4XD 60-69 years, female 2108.6
GTEX-1IGQW-0011-R7a-SM-GPRXV 60-69 years, male 2103.4
GTEX-16XZZ-0011-R7b-SM-7MGVT 60-69 years, male 2005.8
GTEX-ZAJG-0011-R7a-SM-GQ1CU 50-59 years, female 1972.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1970.6
GTEX-1192W-0011-R7a-SM-GJ3PS 60-69 years, male 1866.8
GTEX-11ZU8-0011-R7a-SM-GJ3Q1 60-69 years, male 1824.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1817.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1789.3
GTEX-15SHU-0011-R7a-SM-GQ1DL 40-49 years, female 1784.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1769.6
GTEX-1KD5A-0011-R7a-SM-F3K5Y 50-59 years, male 1766.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1760.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1725.4
GTEX-13QIC-0011-R7b-SM-GIN9M 60-69 years, female 1723.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1711.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1708.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1689.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1687.9
GTEX-11EI6-0011-R7a-SM-GINAN 60-69 years, male 1652.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1652.1
GTEX-1MCQQ-0011-R7a-SM-F649U 60-69 years, male 1649.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 1632.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1621.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1618.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1613.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1601.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 1601.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1571.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1532.6
GTEX-11O72-0011-R7b-SM-GINA9 40-49 years, male 1527.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1518.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1502.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1501.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1473.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1471.6
GTEX-1O9I2-0011-R7a-SM-F2TAI 50-59 years, male 1468.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1467.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1452.6
GTEX-13OVH-0011-R7a-SM-GI4WY 70-79 years, male 1447.5
GTEX-QVJO-0011-R7A-SM-G8W5W 60-69 years, female 1444.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 1425.4
GTEX-1N2DW-0011-R7a-SM-EY5YE 50-59 years, male 1422.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1395.9
GTEX-1N2EF-0011-R7a-SM-F2T9O 60-69 years, male 1378.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1365.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1360.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1359.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1356.9
GTEX-1117F-0011-R7a-SM-H65ZK 60-69 years, female 1335.1
GTEX-1QP6S-0011-R7b-SM-F3K5R 40-49 years, male 1327.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1321.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1316.0
GTEX-1JN6P-0011-R7a-SM-F2TA5 60-69 years, male 1312.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 1310.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 1280.5
GTEX-14JFF-0011-R7b-SM-G9ERI 60-69 years, male 1279.2
GTEX-11EMC-0011-R7a-SM-GJ3PL 60-69 years, female 1274.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1269.6
GTEX-1R9K4-0011-R7b-SM-F3K58 60-69 years, male 1265.2
GTEX-11ZVC-0011-R7b-SM-GI4VH 50-59 years, female 1263.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1258.9
GTEX-1PIIG-0011-R7b-SM-F2T9Y 30-39 years, male 1255.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1252.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1249.2
GTEX-12126-0011-R7a-SM-GJ3Q2 20-29 years, male 1234.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1233.6
GTEX-1PPGY-0011-R7b-SM-F33YV 60-69 years, male 1232.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1226.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 1215.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 1213.9
GTEX-1JMQJ-0011-R7b-SM-F2TA7 50-59 years, male 1212.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1203.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1198.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1197.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1197.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 1195.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1195.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1194.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1194.3
GTEX-1JMPZ-0011-R7b-SM-F2TBB 30-39 years, male 1188.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 1178.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1173.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1170.1
GTEX-1JMOU-0011-R7b-SM-EY5YH 60-69 years, female 1168.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1152.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1147.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1143.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1142.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1141.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 1138.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 1137.4
GTEX-11ZUS-0011-R7a-SM-GI4X5 30-39 years, male 1137.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 1134.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1130.0
GTEX-1NV8Z-0011-R7a-SM-F3K4J 60-69 years, male 1124.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1123.8
GTEX-1RDX4-0011-R7b-SM-F2TBJ 50-59 years, female 1122.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 1118.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 1114.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1113.6
GTEX-1JMQL-0011-R7b-SM-F649W 50-59 years, female 1113.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1111.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1107.3
GTEX-11H98-0011-R7a-SM-GHWOI 50-59 years, male 1101.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 1101.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1100.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1099.8
GTEX-13OW7-0011-R7b-SM-H6613 50-59 years, male 1099.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1097.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1091.7
GTEX-ZAK1-0011-R7a-SM-H7OH1 50-59 years, female 1090.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1090.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1088.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1081.6
GTEX-117XS-0011-R7a-SM-GI4VO 60-69 years, male 1079.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1072.3
GTEX-1IOXB-0011-R7b-SM-HAUZE 50-59 years, male 1072.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1068.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1062.5
GTEX-ZYY3-0011-R7a-SM-H7OGI 60-69 years, female 1061.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1061.0
GTEX-1QMI2-0011-R7a-SM-F648Q 60-69 years, male 1059.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1059.8
GTEX-1P4AB-0011-R7a-SM-F2TAP 50-59 years, male 1054.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1053.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1047.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1046.2
GTEX-11GSO-0011-R7b-SM-H65ZV 60-69 years, male 1042.9
GTEX-ZZPT-0011-R7a-SM-H7OH8 50-59 years, male 1041.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 1040.5
GTEX-1PWST-0011-R7b-SM-F649N 70-79 years, male 1039.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1038.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1035.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1034.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1032.7
GTEX-PVOW-0011-R7A-SM-H6Q8Q 40-49 years, male 1031.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1028.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 1026.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1025.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1024.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1022.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1014.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1014.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1013.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1013.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 1013.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1011.4
GTEX-1N2EE-0011-R7b-SM-F341E 60-69 years, male 1010.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 1005.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1000.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1000.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 999.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 991.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 991.5
GTEX-111FC-0011-R7a-SM-GIN8V 60-69 years, male 983.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 980.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 974.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 972.8
GTEX-1JMLX-0011-R7a-SM-EY5ZK 50-59 years, male 970.5
GTEX-11GS4-0011-R7a-SM-GJ3RK 60-69 years, male 970.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 965.3
GTEX-16GPK-0011-R7b-SM-H7OF8 60-69 years, male 963.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 961.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 960.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 959.1
GTEX-1LSVX-0011-R7b-SM-F2T9T 60-69 years, male 957.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 956.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 954.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 952.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 950.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 950.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 950.0
GTEX-1GN1U-0011-R7a-SM-CE6RE 50-59 years, female 948.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 944.1
GTEX-1KWVE-0011-R7b-SM-F6486 30-39 years, male 941.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 938.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 934.7
GTEX-ZYFD-0011-R7a-SM-GPI8Z 50-59 years, male 930.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 929.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 927.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 918.1
GTEX-1R9PO-0011-R7b-SM-F342B 60-69 years, female 915.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 914.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 911.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 911.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 910.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 910.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 909.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 904.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 894.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 893.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 892.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 889.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 889.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 881.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 879.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 873.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 872.5
GTEX-14E6D-0011-R7b-SM-G9ERK 50-59 years, male 870.8
GTEX-1LG7Y-0011-R7a-SM-F341Q 50-59 years, male 870.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 870.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 870.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 858.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 857.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 856.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 854.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 851.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 846.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 842.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 842.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 839.7
GTEX-1RQEC-0011-R7b-SM-EY5ZS 60-69 years, male 835.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 832.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 827.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 821.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 820.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 813.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 809.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 807.6
GTEX-X4XX-0011-R7A-SM-46MWR 60-69 years, male 801.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 799.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 792.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 789.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 788.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 786.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 782.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 780.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 776.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 768.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 761.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 754.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 743.3
GTEX-X4EP-0011-R7B-SM-4PQZW 60-69 years, female 737.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 730.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 727.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 726.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 715.6
GTEX-1J1OQ-0011-R7b-SM-H7OGB 40-49 years, female 713.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 712.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 705.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 701.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 696.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 665.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 664.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 638.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 632.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 624.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 585.3
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PUTAMEN - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

370.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Putamen
Scaled Tags Per Million: 370.6
FF:10176-103C5 60 years, female 370.6

PUTAMEN - Macaque RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

287.2
Macaque sample Sample description nTPM
Putamen
nTPM: 287.2
Samples: 2

Max nTPM: 312.3
Min nTPM: 262.1
Sample A 262.1
Sample B 312.3

PUTAMEN - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.9
Pig sample Sample description nTPM
Putamen
nTPM: 111.9
Samples: 3

Max nTPM: 140.3
Min nTPM: 95.7
Sample B Female 95.7
Sample C Male 140.3
Sample D Male 99.6

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