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  • SUMMARY

  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:577.2 nTPM
HPA Brain:1168.2 nTPM
GTEx:577.2 nTPM
Pig:995.3 nTPM
Mouse:569.7 nTPM
Allen mouse:0.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1168.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 811.0
2226 Male, age 75, left hemisphere 995.2
1961 Female, age 42, unknown 626.8
Dorsomedial nucleus
nTPM: 737.0
1989 Male, age 62, unknown 1123.0
2017 Female, age 42, unknown 562.9
2041 Female, age 72, unknown 525.0
Lateral hypothalamic area
nTPM: 1168.2
2228 Male, age 66, unknown 1674.0
2271 Male, age 75, both hemispheres 1289.0
1791 Male, age 80, right hemisphere 996.7
2412 Male, age 62, unknown 712.9
Mammillary body
nTPM: 768.4
1923 Female, age 72, unknown 1092.3
2413 Male, age 66, unknown 846.1
1948 Female, age 72, unknown 671.9
1834 Female, age 42, unknown 644.7
1945 Male, age 80, right hemisphere 586.9
Paraventricular nucleus
nTPM: 733.9
2700 Male, age 62, unknown 733.9
Preoptic area
nTPM: 726.3
1907 Male, age 80, right hemisphere 905.4
1861 Female, age 42, unknown 659.8
2414 Female, age 72, unknown 613.8
Supraoptic nucleus
nTPM: 528.8
2835 Female, age 72, unknown 682.2
1894 Female, age 72, unknown 486.6
2043 Male, age 62, unknown 417.7
Ventromedial nucleus
nTPM: 839.6
1982 Female, age 72, unknown 993.6
1822 Female, age 42, unknown 685.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

577.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 577.2
Samples: 257

Max nTPM: 1968.3
Min nTPM: 214.5
Std nTPM: 277.5
Median nTPM: 518.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 1968.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1865.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1751.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1677.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 1633.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1381.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 1360.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1241.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1217.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 1144.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 1083.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1058.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 1017.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1000.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 975.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 969.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 955.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 951.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 937.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 933.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 932.0
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 923.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 894.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 894.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 886.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 873.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 868.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 862.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 853.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 851.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 848.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 842.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 840.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 838.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 837.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 836.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 828.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 823.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 819.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 814.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 805.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 799.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 795.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 789.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 785.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 773.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 773.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 759.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 755.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 753.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 749.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 746.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 743.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 742.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 735.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 734.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 728.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 725.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 720.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 720.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 719.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 719.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 708.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 707.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 704.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 701.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 700.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 699.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 695.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 694.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 685.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 685.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 685.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 684.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 678.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 674.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 671.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 664.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 663.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 657.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 656.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 654.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 637.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 636.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 635.5
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 634.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 629.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 627.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 622.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 622.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 621.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 619.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 617.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 610.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 605.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 601.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 598.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 594.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 592.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 592.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 592.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 590.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 587.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 587.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 585.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 585.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 582.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 577.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 574.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 567.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 561.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 558.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 558.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 557.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 555.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 555.0
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 553.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 551.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 546.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 545.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 542.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 540.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 538.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 534.2
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 527.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 525.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 521.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 519.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 518.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 516.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 514.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 508.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 506.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 504.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 504.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 500.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 497.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 496.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 493.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 492.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 490.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 481.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 481.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 481.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 480.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 480.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 477.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 471.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 464.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 464.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 458.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 457.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 457.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 454.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 454.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 450.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 450.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 448.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 447.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 444.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 443.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 440.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 439.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 432.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 428.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 428.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 426.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 424.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 421.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 421.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 420.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 420.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 418.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 417.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 416.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 416.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 416.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 414.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 412.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 409.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 402.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 400.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 395.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 394.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 389.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 388.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 388.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 388.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 388.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 387.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 386.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 381.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 379.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 378.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 378.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 376.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 372.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 367.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 364.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 364.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 363.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 361.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 361.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 361.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 360.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 360.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 356.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 355.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 354.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 352.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 352.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 352.0
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 348.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 346.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 345.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 344.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 343.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 340.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 330.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 330.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 329.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 325.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 324.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 324.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 324.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 322.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 321.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 315.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 314.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 314.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 313.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 310.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 305.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 305.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 304.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 297.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 295.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 294.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 292.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 289.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 289.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 284.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 276.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 276.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 271.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 270.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 267.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 263.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 254.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 254.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 253.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 250.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 240.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 227.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 227.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 216.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 214.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

995.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 995.3
Samples: 4

Max nTPM: 1462.0
Min nTPM: 725.2
Sample A Female 1462.0
Sample B Female 946.2
Sample C Male 847.9
Sample D Male 725.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

569.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 569.7
Samples: 4

Max nTPM: 626.5
Min nTPM: 531.7
Sample A Male 571.8
Sample B Male 626.5
Sample C Female 548.9
Sample D Female 531.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.7
184 Antisense, RP_Baylor_102654, Mouse strain C57BL/6J (56 days, male) 0.7

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