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  • TISSUE

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  • ARPC2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:105.2 nTPM
HPA Brain:95.9 nTPM
GTEx:105.2 nTPM
Pig:196.9 nTPM
Mouse:159.7 nTPM
Allen mouse:4.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 92.9
2226 Male, age 75, left hemisphere 107.3
1961 Female, age 42, unknown 78.6
Dorsomedial nucleus
nTPM: 71.5
2041 Female, age 72, unknown 82.3
2017 Female, age 42, unknown 67.6
1989 Male, age 62, unknown 64.5
Lateral hypothalamic area
nTPM: 95.9
2271 Male, age 75, both hemispheres 108.8
2228 Male, age 66, unknown 105.9
1791 Male, age 80, right hemisphere 95.7
2412 Male, age 62, unknown 73.3
Mammillary body
nTPM: 81.5
1923 Female, age 72, unknown 97.8
2413 Male, age 66, unknown 85.3
1948 Female, age 72, unknown 81.5
1834 Female, age 42, unknown 73.3
1945 Male, age 80, right hemisphere 69.6
Paraventricular nucleus
nTPM: 76.0
2700 Male, age 62, unknown 76.0
Preoptic area
nTPM: 68.1
1907 Male, age 80, right hemisphere 71.1
1861 Female, age 42, unknown 70.4
2414 Female, age 72, unknown 62.7
Supraoptic nucleus
nTPM: 89.8
1894 Female, age 72, unknown 97.6
2043 Male, age 62, unknown 86.5
2835 Female, age 72, unknown 85.3
Ventromedial nucleus
nTPM: 83.9
1982 Female, age 72, unknown 90.5
1822 Female, age 42, unknown 77.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 105.2
Samples: 257

Max nTPM: 252.4
Min nTPM: 71.5
Std nTPM: 19.6
Median nTPM: 101.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 252.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 219.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 167.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 167.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 155.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 149.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 148.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 145.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 144.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 143.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 141.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 138.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 135.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 135.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 134.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 133.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 132.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 131.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 131.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 129.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 129.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 127.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 126.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 126.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 125.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 124.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 124.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 124.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 123.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 123.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 123.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 123.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 123.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 122.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 122.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 122.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 121.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 121.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 120.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 120.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 119.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 119.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 119.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 118.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 118.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 117.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 117.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 116.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 116.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 116.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 116.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 115.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 115.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 115.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 115.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 115.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 115.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 115.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 114.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 114.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 113.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 112.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 112.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 112.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 111.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 111.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 111.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 111.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 111.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 111.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 110.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 110.4
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 110.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 110.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 109.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 109.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 109.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 109.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 109.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 108.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 108.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 108.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 108.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 108.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 108.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 108.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 107.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 107.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 107.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 107.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 107.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 106.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 106.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 106.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 106.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 106.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 106.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 106.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 105.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 105.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 105.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 105.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 105.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 105.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 105.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 104.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 104.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 104.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 104.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 104.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 104.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 104.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 104.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 104.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 104.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 104.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 103.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 103.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 103.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 103.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 103.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 103.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 103.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 103.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 102.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 102.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 102.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 101.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 101.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 101.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 101.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 101.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 101.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 101.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 100.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 100.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 100.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 100.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 99.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 99.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 99.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 99.8
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 99.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 99.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 99.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 99.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 99.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 99.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 99.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 98.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 98.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 98.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 98.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 98.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 98.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 98.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 98.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 98.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 97.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 97.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 97.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 97.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 97.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 97.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 97.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 97.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 96.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 96.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 96.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 96.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 96.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 95.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 95.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 95.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 95.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 95.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 95.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 95.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 95.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 95.1
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 94.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 94.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 94.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 94.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 94.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 94.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 94.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 94.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 93.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 93.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 93.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 93.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 93.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 93.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 93.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 92.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 92.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 92.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 92.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 92.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 92.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 91.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 91.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 91.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 91.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 91.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 91.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 91.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 91.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 91.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 90.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 90.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 90.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 90.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 90.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 90.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 90.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 90.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 89.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 89.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 88.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 88.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 88.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 88.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 88.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 88.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 88.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 88.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 88.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 87.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 87.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 87.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 87.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 87.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 87.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 86.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 86.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 85.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 85.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 84.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 84.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 84.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 84.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 83.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 83.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 82.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 81.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 81.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 81.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 80.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 80.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 80.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 79.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 78.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 76.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 71.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 71.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

196.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 196.9
Samples: 4

Max nTPM: 264.3
Min nTPM: 158.0
Sample A Female 264.3
Sample B Female 196.4
Sample C Male 168.9
Sample D Male 158.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 159.7
Samples: 4

Max nTPM: 168.4
Min nTPM: 150.4
Sample A Male 150.4
Sample B Male 163.6
Sample C Female 168.4
Sample D Female 156.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.4
69526892 Antisense, RP_050421_01_H01, Mouse strain C57BL/6J (56 days, male) 4.4

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