We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1311.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1311.8
Samples: 152
Max nTPM: 4527.2
Min nTPM: 490.7
Std nTPM: 632.0
Median nTPM: 1173.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
4527.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
4509.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
3703.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
3267.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
2946.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
2668.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
2505.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
2475.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
2384.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
2244.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
2178.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
2109.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
2105.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
2051.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
2029.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1926.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1860.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1826.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
1814.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
1775.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
1769.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1746.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1745.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
1690.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
1686.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1686.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1642.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
1627.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1616.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1605.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1598.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1564.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1560.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1549.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
1535.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1526.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1523.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
1489.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1484.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
1476.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1451.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1450.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1432.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
1411.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
1408.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1408.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1405.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1400.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1395.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
1388.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1354.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1351.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1342.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1341.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1340.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1320.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1307.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1300.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
1300.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
1300.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1291.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1287.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
1285.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
1265.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
1261.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1244.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1241.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1240.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1237.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1216.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
1212.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1204.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
1199.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1196.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
1184.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1175.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
1171.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1169.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1154.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
1150.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1142.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1127.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
1123.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
1118.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1115.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
1112.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1110.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
1107.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
1102.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1098.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1096.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
1089.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
1088.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
1085.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
1078.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
1052.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
1051.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1048.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1047.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
1044.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
1043.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1040.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1017.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
1016.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
1008.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
1000.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
988.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
974.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
972.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
965.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
955.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
953.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
946.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
934.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
927.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
918.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
916.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
910.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
896.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
883.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
873.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
864.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
864.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
863.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
857.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
844.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
843.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
825.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
821.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
820.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
803.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
795.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
785.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
776.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
772.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
768.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
759.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
749.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
741.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
739.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
733.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
678.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
640.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
630.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
628.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
616.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
606.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
587.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
576.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
546.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
535.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
490.7
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.