HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi 		113.092
RNA expressioni
Consensus:1044.1 nTPM
HPA Brain:71.8 nTPM
GTEx:1044.1 nTPM
FANTOM5:29.1 Scaled Tags Per Million
Pig:23.9 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003372
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA003372
Hippocampal formation mean intensity 113.092
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 19.549
Molecular layer of the dentate gyrus 10.209
Granular dentate gyrus 92.043
CA1 - oriens layer 16.774
CA1 - pyramidal layer 89.038
CA1 - radiatum layer 8.588
CA2 - oriens layer 9.270
CA2 - pyramidal layer 81.004
CA2 - radiatum layer 14.226
CA3 - oriens layer 16.399
CA3 - pyramidal layer 113.092
CA3 - radiatum layer 14.834
Stratum lucidum 19.874
Lacunosum moleculare 16.466
Subiculum 18.602

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 71.8
Sample id Sample description nTPM
Hippocampus
nTPM: 66.0
1898 Male, age 80, left hemisphere 98.0
2529 Female, age 94, left hemisphere 75.6
1911 Female, age 85, right hemisphere 61.6
2148 Female, age 91, left hemisphere 55.6
2621 Female, age 67, right hemisphere 54.1
1855 Male, age 76, left hemisphere 51.3
Dentate gyrus
nTPM: 63.8
2530 Female, age 94, left hemisphere 79.5
2010 Male, age 76, both hemispheres 70.4
2246 Female, age 85, both hemispheres 61.9
1927 Female, age 91, both hemispheres 59.6
2531 Female, age 67, both hemispheres 56.9
2528 Male, age 74, both hemispheres 54.7
Entorhinal gyrus
nTPM: 63.4
2686 Male, age 75, right hemisphere 76.0
2117 Female, age 91, right hemisphere 64.4
1938 Female, age 85, left hemisphere 64.1
2764 Male, age 80, right hemisphere 64.0
1787 Male, age 76, left hemisphere 62.1
2613 Female, age 94, left hemisphere 49.8
Hippocampus, CA1
nTPM: 71.8
2749 Male, age 80, left hemisphere 107.2
1873 Female, age 85, both hemispheres 70.5
2045 Male, age 76, both hemispheres 67.5
2082 Female, age 91, right hemisphere 62.4
2527 Male, age 74, both hemispheres 51.6
Hippocampus, CA2
nTPM: 71.6
1963 Male, age 80, left hemisphere 117.6
1892 Male, age 76, both hemispheres 76.6
2437 Female, age 94, left hemisphere 63.7
2113 Female, age 91, right hemisphere 60.5
2249 Male, age 74, both hemispheres 58.0
1940 Female, age 85, left hemisphere 53.3
Hippocampus, CA3
nTPM: 60.2
1867 Male, age 76, both hemispheres 79.9
2137 Male, age 80, left hemisphere 74.6
1891 Female, age 85, both hemispheres 71.8
2436 Male, age 74, both hemispheres 50.9
2861 Female, age 67, both hemispheres 43.5
2620 Female, age 94, left hemisphere 40.3
Parahippocampal cortex
nTPM: 60.7
2018 Male, age 76, both hemispheres 85.0
2250 Female, age 67, right hemisphere 69.4
1990 Female, age 91, right hemisphere 64.4
1933 Female, age 85, both hemispheres 62.2
2532 Female, age 72, left hemisphere 58.6
1850 Male, age 80, both hemispheres 58.4
2245 Female, age 91, both hemispheres 56.6
2692 Male, age 74, both hemispheres 55.2
2622 Female, age 67, right hemisphere 50.2
2693 Female, age 94, both hemispheres 47.5
Perirhinal gyrus
nTPM: 66.3
1841 Female, age 85, right hemisphere 78.5
1847 Female, age 91, left hemisphere 71.8
2848 Male, age 76, right hemisphere 68.3
1794 Male, age 80, right hemisphere 60.4
2521 Female, age 94, right hemisphere 52.5
Subiculum
nTPM: 65.5
1977 Female, age 85, both hemispheres 83.8
2042 Male, age 76, both hemispheres 79.4
2729 Female, age 91, right hemisphere 62.7
1901 Male, age 80, both hemispheres 59.7
2619 Male, age 74, both hemispheres 54.1
2438 Female, age 94, left hemisphere 53.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 1044.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1044.1
Samples: 255

Max nTPM: 3346.5
Min nTPM: 505.7
Std nTPM: 418.0
Median nTPM: 949.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3346.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3207.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2366.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2247.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 2206.7
GTEX-1MJK2-0011-R1b-SM-F649H 50-59 years, male 2156.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 2119.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2061.7
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 2006.0
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 1958.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1937.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 29.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.1
FF:10169-103B7 60 years, female 43.6
FF:10153-102I9 76 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.9
Pig sample Sample description nTPM
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 31.3
Min nTPM: 19.2
Sample A Female 31.3
Sample B Female 20.3
Sample C Male 19.2
Sample D Male 20.0
Dorsal hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 28.2
Min nTPM: 18.8
Sample A Female 28.2
Sample B Female 25.0
Sample C Male 23.5
Sample D Male 18.8
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 25.8
Min nTPM: 17.0
Sample A Female 20.3
Sample B Female 25.8
Sample C Male 22.9
Sample D Male 17.0
Ventral hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.9
Sample A Female 23.3
Sample B Female 17.9
Sample C Male 20.1
Sample D Male 20.5

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