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  • TISSUE

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  • RPS9
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:749.7 nTPM
HPA Brain:21.8 nTPM
GTEx:749.7 nTPM
Pig:333.8 nTPM
Mouse:698.2 nTPM
Allen mouse:16.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 10.9
2226 Male, age 75, left hemisphere 17.1
1961 Female, age 42, unknown 4.7
Dorsomedial nucleus
nTPM: 17.9
2017 Female, age 42, unknown 30.2
1989 Male, age 62, unknown 17.5
2041 Female, age 72, unknown 6.0
Lateral hypothalamic area
nTPM: 19.3
1791 Male, age 80, right hemisphere 26.7
2271 Male, age 75, both hemispheres 26.0
2412 Male, age 62, unknown 15.5
2228 Male, age 66, unknown 8.9
Mammillary body
nTPM: 11.9
1834 Female, age 42, unknown 17.1
2413 Male, age 66, unknown 12.6
1945 Male, age 80, right hemisphere 11.7
1948 Female, age 72, unknown 10.1
1923 Female, age 72, unknown 7.9
Paraventricular nucleus
nTPM: 21.8
2700 Male, age 62, unknown 21.8
Preoptic area
nTPM: 7.7
2414 Female, age 72, unknown 13.0
1861 Female, age 42, unknown 6.3
1907 Male, age 80, right hemisphere 3.7
Supraoptic nucleus
nTPM: 14.3
1894 Female, age 72, unknown 21.2
2835 Female, age 72, unknown 13.7
2043 Male, age 62, unknown 8.0
Ventromedial nucleus
nTPM: 7.2
1982 Female, age 72, unknown 7.8
1822 Female, age 42, unknown 6.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

749.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 749.7
Samples: 257

Max nTPM: 4131.8
Min nTPM: 246.9
Std nTPM: 380.2
Median nTPM: 655.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 4131.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 2303.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 2101.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1988.2
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1802.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 1763.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 1761.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1746.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 1599.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1559.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 1475.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 1337.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 1323.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 1320.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 1315.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 1282.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 1262.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 1257.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 1250.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 1233.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1209.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 1209.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 1207.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 1192.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 1140.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 1134.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 1125.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 1121.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1116.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 1108.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 1103.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1100.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 1099.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 1087.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 1084.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 1073.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 1057.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 1053.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 1026.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 1018.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 1018.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1004.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 973.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 969.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 967.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 963.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 949.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 938.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 910.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 908.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 902.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 897.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 893.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 891.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 890.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 877.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 877.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 876.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 868.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 865.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 863.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 847.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 844.6
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 842.4
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 841.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 839.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 836.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 831.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 825.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 825.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 819.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 818.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 815.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 815.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 802.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 790.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 789.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 786.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 785.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 783.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 777.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 776.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 772.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 772.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 771.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 765.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 763.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 758.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 758.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 756.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 749.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 746.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 745.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 744.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 741.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 741.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 735.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 735.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 734.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 734.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 727.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 723.8
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 720.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 715.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 715.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 713.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 712.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 710.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 709.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 709.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 705.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 704.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 703.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 695.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 695.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 690.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 689.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 686.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 686.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 680.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 672.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 671.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 661.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 659.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 658.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 657.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 656.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 656.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 655.1
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 654.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 647.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 646.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 645.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 644.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 641.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 641.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 636.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 631.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 629.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 628.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 627.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 624.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 624.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 624.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 622.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 621.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 620.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 620.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 618.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 618.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 616.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 613.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 610.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 610.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 609.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 607.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 604.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 603.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 599.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 597.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 596.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 595.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 592.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 585.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 584.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 584.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 581.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 578.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 576.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 573.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 569.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 568.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 565.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 564.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 564.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 560.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 560.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 558.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 558.9
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 556.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 554.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 553.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 549.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 545.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 543.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 543.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 543.0
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 540.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 540.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 537.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 536.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 536.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 535.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 534.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 529.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 520.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 519.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 517.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 516.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 510.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 508.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 507.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 507.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 505.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 497.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 492.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 490.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 490.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 489.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 486.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 486.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 484.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 484.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 483.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 483.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 478.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 474.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 474.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 471.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 468.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 466.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 465.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 465.2
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 461.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 461.1
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 460.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 460.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 458.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 453.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 451.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 450.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 449.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 448.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 448.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 447.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 446.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 446.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 442.9
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 442.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 438.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 433.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 432.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 429.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 426.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 405.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 400.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 398.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 395.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 395.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 362.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 360.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 357.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 348.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 324.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 280.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 248.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 246.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

333.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 333.8
Samples: 4

Max nTPM: 517.4
Min nTPM: 195.2
Sample A Female 517.4
Sample B Female 320.9
Sample C Male 301.8
Sample D Male 195.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

698.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 698.2
Samples: 4

Max nTPM: 819.9
Min nTPM: 614.6
Sample A Male 682.8
Sample B Male 819.9
Sample C Female 614.6
Sample D Female 675.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 16.8
68563128 Antisense, RP_050125_01_B08, Mouse strain C57BL/6J (56 days, male) 16.8

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