HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:839.9 nTPM
HPA Brain:592.2 nTPM
GTEx:839.9 nTPM
FANTOM5:82.1 Scaled Tags Per Million
Pig:317.5 nTPM
Mouse:329.4 nTPM
Allen mouse:14.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 592.2
Sample id Sample description nTPM
Hippocampus
nTPM: 571.1
1898 Male, age 80, left hemisphere 696.0
2529 Female, age 94, left hemisphere 598.9
2621 Female, age 67, right hemisphere 592.6
1911 Female, age 85, right hemisphere 525.6
1855 Male, age 76, left hemisphere 517.6
2148 Female, age 91, left hemisphere 496.0
Dentate gyrus
nTPM: 562.3
2530 Female, age 94, left hemisphere 685.4
2010 Male, age 76, both hemispheres 603.8
1927 Female, age 91, both hemispheres 532.0
2246 Female, age 85, both hemispheres 529.3
2531 Female, age 67, both hemispheres 520.5
2528 Male, age 74, both hemispheres 502.7
Entorhinal gyrus
nTPM: 556.7
1938 Female, age 85, left hemisphere 600.8
2764 Male, age 80, right hemisphere 577.8
2686 Male, age 75, right hemisphere 569.5
2117 Female, age 91, right hemisphere 559.3
1787 Male, age 76, left hemisphere 554.7
2613 Female, age 94, left hemisphere 478.3
Hippocampus, CA1
nTPM: 557.2
2749 Male, age 80, left hemisphere 606.1
1873 Female, age 85, both hemispheres 566.5
2045 Male, age 76, both hemispheres 560.6
2082 Female, age 91, right hemisphere 548.4
2527 Male, age 74, both hemispheres 504.4
Hippocampus, CA2
nTPM: 563.2
1963 Male, age 80, left hemisphere 627.3
2437 Female, age 94, left hemisphere 608.6
1892 Male, age 76, both hemispheres 599.8
2249 Male, age 74, both hemispheres 520.2
1940 Female, age 85, left hemisphere 512.9
2113 Female, age 91, right hemisphere 510.5
Hippocampus, CA3
nTPM: 544.7
1867 Male, age 76, both hemispheres 605.4
2861 Female, age 67, both hemispheres 556.1
2137 Male, age 80, left hemisphere 553.1
1891 Female, age 85, both hemispheres 534.2
2436 Male, age 74, both hemispheres 533.2
2620 Female, age 94, left hemisphere 485.9
Parahippocampal cortex
nTPM: 522.4
2018 Male, age 76, both hemispheres 625.2
1850 Male, age 80, both hemispheres 616.9
2250 Female, age 67, right hemisphere 543.2
1933 Female, age 85, both hemispheres 540.2
1990 Female, age 91, right hemisphere 521.2
2532 Female, age 72, left hemisphere 518.3
2245 Female, age 91, both hemispheres 515.2
2622 Female, age 67, right hemisphere 478.3
2692 Male, age 74, both hemispheres 451.9
2693 Female, age 94, both hemispheres 413.4
Perirhinal gyrus
nTPM: 592.2
1847 Female, age 91, left hemisphere 674.0
1841 Female, age 85, right hemisphere 642.2
1794 Male, age 80, right hemisphere 639.5
2848 Male, age 76, right hemisphere 538.1
2521 Female, age 94, right hemisphere 467.1
Subiculum
nTPM: 541.0
2042 Male, age 76, both hemispheres 600.2
1977 Female, age 85, both hemispheres 589.7
1901 Male, age 80, both hemispheres 520.6
2438 Female, age 94, left hemisphere 520.4
2619 Male, age 74, both hemispheres 517.3
2729 Female, age 91, right hemisphere 497.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 839.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 839.9
Samples: 255

Max nTPM: 1982.1
Min nTPM: 541.9
Std nTPM: 201.0
Median nTPM: 797.6
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 1982.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1787.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1460.1
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 1424.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1386.3
GTEX-1LKK1-0011-R1b-SM-F2TAF 50-59 years, female 1375.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1368.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1281.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1277.2
GTEX-1NV8Z-0011-R1b-SM-F647K 60-69 years, male 1258.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1233.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 82.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.1
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 60.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 317.5
Pig sample Sample description nTPM
Subiculum
nTPM: 296.1
Samples: 4

Max nTPM: 393.0
Min nTPM: 249.2
Sample A Female 393.0
Sample B Female 274.1
Sample C Male 268.1
Sample D Male 249.2
Dorsal hippocampus
nTPM: 317.5
Samples: 4

Max nTPM: 391.1
Min nTPM: 256.7
Sample A Female 391.1
Sample B Female 311.2
Sample C Male 311.1
Sample D Male 256.7
Entorhinal cortex
nTPM: 296.5
Samples: 4

Max nTPM: 347.0
Min nTPM: 251.9
Sample A Female 284.6
Sample B Female 347.0
Sample C Male 302.6
Sample D Male 251.9
Ventral hippocampus
nTPM: 297.7
Samples: 4

Max nTPM: 340.2
Min nTPM: 246.3
Sample A Female 305.5
Sample B Female 246.3
Sample C Male 340.2
Sample D Male 298.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 329.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 320.9
Samples: 4

Max nTPM: 345.9
Min nTPM: 303.9
Sample A Male 303.9
Sample B Male 310.3
Sample C Female 345.9
Sample D Female 323.6
Hippocampal formation
nTPM: 329.4
Samples: 4

Max nTPM: 364.5
Min nTPM: 298.6
Sample A Male 364.5
Sample B Male 298.6
Sample C Female 304.1
Sample D Female 350.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
74882810 Antisense, RP_060315_04_H02, Mouse strain C57BL/6J (56 days, male) 14.6
69818299 Antisense, RP_050510_04_G12, Mouse strain C57BL/6J (56 days, male) 14.5

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